RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 PRDM5Q9NQX1 630 aaPredicted RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 MARCH2Q9P0N8 246 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 DFFAO00273 331 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 CACNG3O60359 315 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 SPAG7O75391 227 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 SOD2P04179 222 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 OR1D2P34982 312 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 GJA8P48165 433 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 RING1Q06587 406 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 MS4A13Q5J8X5 152 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 ACBD5Q5T8D3 534 aaPredicted RBP15.3■□□□□ 0.04
VCAN-211ENST00000513984 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
VCAN-211ENST00000513984 LRRC49Q8IUZ0 686 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 ZNF276Q8N554 614 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 AGAP3Q96P47 875 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 SMYD2Q9NRG4 433 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 NDFIP2Q9NV92 336 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 MOCS1Q9NZB8 636 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 HSFX1Q9UBD0 423 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 GGA2Q9UJY4 613 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 MYLKQ15746 1914 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 OBSL1O75147 1896 aa15.3■□□□□ 0.04
VCAN-211ENST00000513984 IGLV3-10A0A075B6K4 115 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 ARHGAP42A6NI28 874 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 MAFKO60675 156 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 ALDH1A2O94788 518 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TBX18O95935 607 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 JCHAINP01591 159 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 PGAM1P18669 254 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 KRT4P19013 534 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 NFKB1P19838 968 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 MGAT1P26572 445 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 WDR4P57081 412 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 ARHGAP36Q6ZRI8 547 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CPLX4Q7Z7G2 160 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 LRRC34Q8IZ02 419 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 GIPC2Q8TF65 315 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 ALKBH8Q96BT7 664 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 ARMC5Q96C12 935 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 IL12RB2Q99665 862 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 MLPHQ9BV36 600 aaPredicted RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 MLXIPLQ9NP71 852 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 MPP6Q9NZW5 540 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 AFF4Q9UHB7 1163 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 KIAA0100Q14667 2235 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 PLXNA4Q9HCM2 1894 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TLR5O60602 858 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 FAM155BO75949 473 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 ASMTLO95671 621 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 RHOQP17081 205 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 SESN2P58004 480 aaPredicted RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 MTA1Q13330 715 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 LRRC26Q2I0M4 334 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TIGD7Q6NT04 549 aaPredicted RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 TRMT10BQ6PF06 316 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 FBXO46Q6PJ61 603 aaPredicted RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CTAGE3PQ8IX95 158 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 SLC39A11Q8N1S5 342 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 UMODL1-AS1Q8N2C9 162 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CNTD1Q8N815 330 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 MAGEB18Q96M61 343 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CDK5RAP1Q96SZ6 601 aaKnown RBP15.29■□□□□ 0.04
VCAN-211ENST00000513984 CLSTN3Q9BQT9 956 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 HERC2P3Q9BVR0 1158 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 C11orf49Q9H6J7 331 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 CASS4Q9NQ75 786 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 TMEM248Q9NWD8 314 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 DONSONQ9NYP3 566 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 VANGL2Q9ULK5 521 aa15.29■□□□□ 0.04
VCAN-211ENST00000513984 SLC12A8A0AV02 714 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 MATN3O15232 486 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 ABLIM3O94929 683 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 CCNB1P14635 433 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 CA4P22748 312 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 KPNA1P52294 538 aaPredicted RBP15.28■□□□□ 0.04
VCAN-211ENST00000513984 CRADDP78560 199 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 DSG1Q02413 1049 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 TTC39BQ5VTQ0 682 aaPredicted RBP15.28■□□□□ 0.04
VCAN-211ENST00000513984 SNX30Q5VWJ9 437 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 OR52K1Q8NGK4 314 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 GDAP1Q8TB36 358 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
VCAN-211ENST00000513984 OXNAD1Q96HP4 312 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms