RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 LRRC8EQ6NSJ5 796 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 C16orf89Q6UX73 402 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ANKRD13AQ8IZ07 590 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ZBTB8BQ8NAP8 495 aaPredicted RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 PKP2Q99959 881 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 OXCT2Q9BYC2 517 aaPredicted RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 ASB7Q9H672 318 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 COG4Q9H9E3 785 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ITGA11Q9UKX5 1188 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 APOL1O14791 398 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 MT-CO1P00395 513 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 CPA3P15088 417 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 AOC1P19801 751 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 RPL10P27635 214 aaKnown RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 CPOXP36551 454 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 XIAPP98170 497 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 MYBPC1Q00872 1141 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 TMEM132DQ14C87 1099 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 Q3C1V9 767 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ZNF484Q5JVG2 852 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 TTC16Q8NEE8 873 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ACTRT2Q8TDY3 377 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 RMND5BQ96G75 393 aaPredicted RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 ABHD8Q96I13 439 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 CPB2Q96IY4 423 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 TWNKQ96RR1 684 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ELOVL4Q9GZR5 314 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 SDCBP2Q9H190 292 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 TXNRD2Q9NNW7 524 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 PDGFCQ9NRA1 345 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 ADARB2Q9NS39 739 aaKnown RBP9.86□□□□□ -0.83
VCAN-210ENST00000513960 ZNF510Q9Y2H8 683 aa9.86□□□□□ -0.83
VCAN-210ENST00000513960 RNF103-CHMP3A0A140T963 221 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ASB14A6NK59 587 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 SOCS7O14512 581 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CCNT2O60583 730 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 CILPO75339 1184 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 GARSP41250 739 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 SLC9B1Q4ZJI4 515 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 KIAA0319LQ8IZA0 1049 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ARFGAP1Q8N6T3 406 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ZNF781Q8N8C0 355 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 MROH8Q9H579 483 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 RBPJLQ9UBG7 517 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 HMGXB4Q9UGU5 601 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CIDEBQ9UHD4 219 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 C3orf70A6NLC5 250 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 PDLIM1O00151 329 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 GPD1P21695 349 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 EIF2B2P49770 351 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 SERPINB9P50453 376 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ABCE1P61221 599 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 CDKL1Q00532 357 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 HNRNPDQ14103 355 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 TEDDM1Q5T9Z0 273 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 TTC33Q6PID6 262 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 SNX31Q8N9S9 440 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 DNAAF3Q8N9W5 541 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CYGBQ8WWM9 190 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 GFM2Q969S9 779 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 SGF29Q96ES7 293 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ZNF512Q96ME7 567 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 NPAS2Q99743 824 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CIB1Q99828 191 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CNPY3Q9BT09 278 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 IL1RL2Q9HB29 575 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 GTSE1Q9NYZ3 720 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 C6orf203Q9P0P8 240 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 SIRPGQ9P1W8 387 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CNTN3Q9P232 1028 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 TEX264Q9Y6I9 313 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CNMDO75829 334 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 TRUB2O95900 331 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 THRAP10827 490 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 ZFXP17010 805 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 RBP5P82980 135 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 KYAT1Q16773 422 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 TMEM198Q66K66 360 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 UTS2BQ765I0 119 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 DDHD1Q8NEL9 900 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 CMASQ8NFW8 434 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 PDCD6IPQ8WUM4 868 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 ATP6V1E2Q96A05 226 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 DHRS4Q9BTZ2 278 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 GCOM2Q9BZD3 368 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 XPNPEP3Q9NQH7 507 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 TRNAU1APQ9NX07 287 aaKnown RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 BARX2Q9UMQ3 279 aaPredicted RBP9.85□□□□□ -0.83
VCAN-210ENST00000513960 GMEB1Q9Y692 573 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 LCTP09848 1927 aa9.85□□□□□ -0.83
VCAN-210ENST00000513960 KLF11O14901 512 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 COQ9O75208 318 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 C22orf31O95567 290 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 VTNP04004 478 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 IQCF3P0C7M6 154 aa9.84□□□□□ -0.83
VCAN-210ENST00000513960 ERVK-10P10266 1014 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms