RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ITGA11Q9UKX5 1188 aa7.9□□□□□ -1.14
CLCN3-209ENST00000513761 SNCAIPQ9Y6H5 919 aa7.9□□□□□ -1.14
CLCN3-209ENST00000513761 SPEF2Q9C093 1822 aa7.9□□□□□ -1.14
CLCN3-209ENST00000513761 KANSL1LA0AUZ9 987 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 KPNA4O00629 521 aaPredicted RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 TRIM38O00635 465 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 UGT1A9O60656 530 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 TMEM63AO94886 807 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 PYGLP06737 847 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 CTSHP09668 335 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 RAB27AP51159 221 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 GTF2A2P52657 109 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 NR1D2Q14995 579 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 ZRANB3Q5FWF4 1079 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 PTF1AQ7RTS3 328 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 APOBEC3FQ8IUX4 373 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 PPP1R10Q96QC0 940 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 NOL6Q9H6R4 1146 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 UGT1A7Q9HAW7 530 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 UGT1A10Q9HAW8 530 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 UGT1A8Q9HAW9 530 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 GIMAP4Q9NUV9 329 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 MYH6P13533 1939 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 CAMTA1Q9Y6Y1 1673 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 FAM95CA0A1B0GW59 222 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 TCRBV7S3A2A0A539 114 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 MAGEB16A2A368 324 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 PAPSS1O43252 624 aaPredicted RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 TRMUO75648 421 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 SOAT2O75908 522 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 ASS1P00966 412 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 GOT1P17174 413 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 HLA-DPA1P20036 260 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 SCNN1BP51168 640 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 XIAPP98170 497 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 DPY19L2Q6NUT2 758 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 LRRC8DQ7L1W4 858 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 CAMK1DQ8IU85 385 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 ADGRF2Q8IZF7 708 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 DSELQ8IZU8 1212 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 ACMSDQ8TDX5 336 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 RBBP8Q99708 897 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 BDH2Q9BUT1 245 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 RBM22Q9NW64 420 aaKnown RBP eCLIP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 SNTG2Q9NY99 539 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 EGFL7Q9UHF1 273 aa7.9□□□□□ -1.15
CLCN3-209ENST00000513761 UBQLN1Q9UMX0 589 aaKnown RBP7.9□□□□□ -1.15
CLCN3-209ENST00000513761 PTP4A2Q12974 167 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 LPIN1Q14693 890 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 NOMO1Q15155 1222 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF618Q5T7W0 954 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 NOTUMQ6P988 496 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 CENPLQ8N0S6 344 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TAGAPQ8N103 731 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 FAM156AQ8NDB6 213 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 SLC2A14Q8TDB8 520 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 FAXDC2Q96IV6 333 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 LENG8Q96PV6 779 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 STN1Q9H668 368 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 NOL11Q9H8H0 719 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DSEQ9UL01 958 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DYNC1LI2O43237 492 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TIPRLO75663 272 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 CFHP08603 1231 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 UNGP13051 313 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 GSSP48637 474 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 RALGDSQ12967 914 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 KIAA1841Q6NSI8 718 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF513Q8N8E2 541 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 RTKNQ9BST9 563 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 POMPQ9Y244 141 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 RAP2CQ9Y3L5 183 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ACKR2O00590 384 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ACTR3P61158 418 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TRIM25Q14258 630 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DCAF4L1Q3SXM0 396 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TXNRD3NBQ6F5E7 133 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 CHSY1Q86X52 802 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TRIM62Q9BVG3 475 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 PRDM12Q9H4Q4 367 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 NT5MQ9NPB1 228 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ZC4H2Q9NQZ6 224 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 PNPLA3Q9NST1 481 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 PRPF19Q9UMS4 504 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 CCNE2O96020 404 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 C4BPAP04003 597 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 ADSSP30520 456 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 LSM3P62310 102 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 NAB1Q13506 487 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 CAPSQ13938 189 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 DGCR6Q14129 220 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 FRG1Q14331 258 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 PAN2Q504Q3 1202 aaKnown RBP7.89□□□□□ -1.15
CLCN3-209ENST00000513761 MRNIPQ6NTE8 343 aa7.89□□□□□ -1.15
CLCN3-209ENST00000513761 TRMT10BQ6PF06 316 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms