RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CYP4X1Q8N118 509 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 AGGF1Q8N302 714 aaeCLIP8.58□□□□□ -1.04
RNF4-220ENST00000513578 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
RNF4-220ENST00000513578 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 SLC44A1Q8WWI5 657 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
RNF4-220ENST00000513578 TMEM106CQ9BVX2 250 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 ZYG11BQ9C0D3 744 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 GBA3Q9H227 469 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 KLHL8Q9P2G9 620 aaPredicted RBP8.58□□□□□ -1.04
RNF4-220ENST00000513578 ZNF180Q9UJW8 692 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 CHMP2BQ9UQN3 213 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 PCDHA11Q9Y5I1 949 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 SNX10Q9Y5X0 201 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 MRPL42Q9Y6G3 142 aaKnown RBP8.58□□□□□ -1.04
RNF4-220ENST00000513578 DNAH12Q6ZR08 3092 aa8.58□□□□□ -1.04
RNF4-220ENST00000513578 SZT2Q5T011 3432 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 TCRBV9S1A1TA0A576 114 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 MAGEB16A2A368 324 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ZNF840PA6NDX5 716 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SDR42E2A6NKP2 422 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SMIM23A6NLE4 172 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNF4-220ENST00000513578 TLR5O60602 858 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 BANF1O75531 89 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SEC24AO95486 1093 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 C1RP00736 705 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 URODP06132 367 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SRGAP2BP0DMP2 458 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 CHN1P15882 459 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 PSMB4P28070 264 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 CD68P34810 354 aaPredicted RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 ATP5C1P36542 298 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 MSH2P43246 934 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 MAPKAPK2P49137 400 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 NPY2RP49146 381 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 YBEYP58557 167 aaPredicted RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 GUCY1A3Q02108 690 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 EFEMP1Q12805 493 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 PLD1Q13393 1074 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 NAB1Q13506 487 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 PRPSAP1Q14558 356 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ANO4Q32M45 955 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 C10orf120Q5SQS8 335 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 FAXCQ5TGI0 409 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 RWDD4Q6NW29 188 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 C14orf80Q86SX3 495 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 TP53INP2Q8IXH6 220 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 PDCD7Q8N8D1 485 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 STKLD1Q8NE28 680 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 GSDMBQ8TAX9 411 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 MZB1Q8WU39 189 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 DCAKDQ8WVC6 231 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ATXN2LQ8WWM7 1075 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 TTC17Q96AE7 1141 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ALKBH8Q96BT7 664 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 XPO6Q96QU8 1125 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 FCRL5Q96RD9 977 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 GORASP1Q9BQQ3 440 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SLC39A8Q9C0K1 460 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SIK2Q9H0K1 926 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 PLAC1Q9HBJ0 212 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 CASS4Q9NQ75 786 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 MOCS1Q9NZB8 636 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 UXTQ9UBK9 157 aaPredicted RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 ZNF212Q9UDV6 495 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ZC3H7BQ9UGR2 993 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 DNMT3LQ9UJW3 386 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 NUDT5Q9UKK9 219 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 SMG5Q9UPR3 1016 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 TTLL3Q9Y4R7 772 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 ASB3Q9Y575 518 aa8.57□□□□□ -1.04
RNF4-220ENST00000513578 KIAA0100Q14667 2235 aaKnown RBP8.57□□□□□ -1.04
RNF4-220ENST00000513578 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 SLC12A8A0AV02 714 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 GMNCA6NCL1 334 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 ARHGAP42A6NI28 874 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 FAM159BA6NKW6 160 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 RASA4BC9J798 803 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 POC1B-GALNT4F8VUJ3 575 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 KCNK1O00180 336 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
RNF4-220ENST00000513578 RASA4O43374 803 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 AVILO75366 819 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 SOAT2O75908 522 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 ANXA9O76027 345 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 LATS1O95835 1130 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 FAM107AO95990 144 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 CPP00450 1065 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 LINC00271P0C7V0 271 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 CTSAP10619 480 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 CCNB1P14635 433 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 BRAFP15056 766 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 PGAM1P18669 254 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 ALDH1A3P47895 512 aa8.56□□□□□ -1.04
RNF4-220ENST00000513578 ZBTB17Q13105 803 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms