RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 F5H5T6 163 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 SGK1O00141 431 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ZNF197O14709 1029 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 NCAM2O15394 837 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 SEC31AO94979 1220 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 CKMP06732 381 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 POU3F3P20264 500 aaPredicted RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 MCM3P25205 808 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 SERPINB6P35237 376 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 GARSP41250 739 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 RPS24P62847 133 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 WASHC5Q12768 1159 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 USP4Q13107 963 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CUL1Q13616 776 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 COL19A1Q14993 1142 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ARHGAP15Q53QZ3 475 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 RARS2Q5T160 578 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 FAM182AQ5T1J6 154 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 RNF43Q68DV7 783 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 LRRC31Q6UY01 552 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ARHGAP36Q6ZRI8 547 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CIR1Q86X95 450 aaPredicted RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CFAP52Q8N1V2 620 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 LZTR1Q8N653 840 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CCDC89Q8N998 374 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 DEPDC1BQ8WUY9 529 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 TFB1MQ8WVM0 346 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 RSAD2Q8WXG1 361 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ART4Q93070 314 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 TSGA13Q96PP4 275 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 BRD8Q9H0E9 1235 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 IGFLR1Q9H665 355 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CLEC1BQ9P126 229 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 WHRNQ9P202 907 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ZMYM5Q9UJ78 669 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 CDH22Q9UJ99 828 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
DHFR-206ENST00000513048 ZFP37Q9Y6Q3 630 aaPredicted RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 RANBP2P49792 3224 aaKnown RBP9.6□□□□□ -0.87
DHFR-206ENST00000513048 SHROOM3Q8TF72 1996 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 LAMA2P24043 3122 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 E2F8A0AVK6 867 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 DNALI1O14645 258 aaPredicted RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 TRDMT1O14717 391 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 SCAMP3O14828 347 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 PPP1R12AO14974 1030 aaPredicted RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 KCNN4O15554 427 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 MAFKO60675 156 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 GCATO75600 419 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 PEX11BO96011 259 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 IFNB1P01574 187 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 FAM153BP0C7A2 387 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ITIH2P19823 946 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 MX2P20592 715 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 MAPKAPK2P49137 400 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 VPS41P49754 854 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 NDST2P52849 883 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 CDH4P55283 916 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ZNF33AQ06730 810 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ADGRE1Q14246 886 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 GRIN2CQ14957 1233 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ZNF77Q15935 545 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 CTC1Q2NKJ3 1217 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 P3H1Q32P28 736 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 FAM153CQ494X1 144 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 RABGAP1LQ5R372 815 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 BEND6Q5SZJ8 279 aaPredicted RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 RNASEH2BQ5TBB1 312 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 HIBCHQ6NVY1 386 aaPredicted RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 CHST9Q7L1S5 443 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 GSTA5Q7RTV2 222 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 TFAP2DQ7Z6R9 452 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 BBS7Q8IWZ6 715 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 CPXM2Q8N436 756 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 OR52K2Q8NGK3 314 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 CCHCR1Q8TD31 782 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 HTR3CQ8WXA8 447 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 IFT81Q8WYA0 676 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ING5Q8WYH8 240 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.87
DHFR-206ENST00000513048 FATE1Q969F0 183 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 PPP2R3CQ969Q6 453 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 RSPRY1Q96DX4 576 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 SNF8Q96H20 258 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 LRRC3BQ96PB8 259 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 DDX50Q9BQ39 737 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 S1PR5Q9H228 398 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ASIC3Q9UHC3 531 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 FAM153AQ9UHL3 310 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 ZNF510Q9Y2H8 683 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 MRPS23Q9Y3D9 190 aaKnown RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 MTCH2Q9Y6C9 303 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
DHFR-206ENST00000513048 KIF26AQ9ULI4 1882 aaPredicted RBP9.59□□□□□ -0.87
DHFR-206ENST00000513048 A0A0A0MRY4 1105 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms