RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZNF233A6NK53 670 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 PLD2O14939 933 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 MTSS1O43312 755 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 MAGEC1O60732 1142 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 RNASEH1O60930 286 aaKnown RBP9.47□□□□□ -0.89
NUP54-211ENST00000512151 GCNT3O95395 438 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
NUP54-211ENST00000512151 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
NUP54-211ENST00000512151 LIPCP11150 499 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 POLR2EP19388 210 aaKnown RBP9.47□□□□□ -0.89
NUP54-211ENST00000512151 TNFRSF8P28908 595 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CD97P48960 835 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 POLE2P56282 527 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CEBPZQ03701 1054 aaKnown RBP9.47□□□□□ -0.89
NUP54-211ENST00000512151 NFKBIBQ15653 356 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 MANEAQ5SRI9 462 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 ZFAND4Q86XD8 727 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 SLC22A18ASQ8N1D0 253 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 OR13H1Q8NG92 308 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 KLK6Q92876 244 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 TTC17Q96AE7 1141 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 FAM131CQ96AQ9 280 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CGRRF1Q99675 332 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 SLC12A9Q9BXP2 914 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CLIC5Q9NZA1 410 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 MARCH2Q9P0N8 246 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 ANAPC2Q9UJX6 822 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 DMTF1Q9Y222 760 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 PCDHA5Q9Y5H7 936 aa9.47□□□□□ -0.89
NUP54-211ENST00000512151 CELSR2Q9HCU4 2923 aa9.46□□□□□ -0.89
NUP54-211ENST00000512151 EME2A4GXA9 379 aaPredicted RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 PRAMEF26H0Y7S4 382 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TCEA3O75764 348 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 FAM200BP0CF97 657 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 ALPPL2P10696 532 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 RALAP11233 206 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 VAV1P15498 845 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 PRLRP16471 622 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 C5AR1P21730 350 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 ELAVL4P26378 380 aaKnown RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 DCTP40126 519 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 CSKP41240 450 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TRIP4Q15650 581 aaPredicted RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 TRIM69Q86WT6 500 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TICAM1Q8IUC6 712 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 CRYBG2Q8N1P7 616 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 FBXO39Q8N4B4 442 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 LARP4BQ92615 738 aaKnown RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 DNAJC19Q96DA6 116 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TMA16Q96EY4 203 aaKnown RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 CALML4Q96GE6 196 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TNIP3Q96KP6 325 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TWNKQ96RR1 684 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 SPENQ96T58 3664 aaKnown RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 FZD3Q9NPG1 666 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 ZNF71Q9NQZ8 489 aaPredicted RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 SLCO3A1Q9UIG8 710 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 TPX2Q9ULW0 747 aaKnown RBP9.46□□□□□ -0.9
NUP54-211ENST00000512151 USP3Q9Y6I4 520 aa9.46□□□□□ -0.9
NUP54-211ENST00000512151 RP1L1Q8IWN7 2480 aaPredicted RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 UBE4BO95155 1302 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 GOLGA6L7A0A1B0GV03 622 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 MUSKO15146 869 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 SLC31A1O15431 190 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 SLC26A4O43511 780 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 PLRG1O43660 514 aaKnown RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 AGFG2O95081 481 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 TNNI1P19237 187 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 MZF1P28698 734 aaPredicted RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 HOXD13P35453 343 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 UBA7P41226 1012 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 NDST1P52848 882 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 CLDN2P57739 230 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 SURF1Q15526 300 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 BMT2Q1RMZ1 405 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 ZCCHC8Q6NZY4 707 aaKnown RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 RFWD3Q6PCD5 774 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 MMS22LQ6ZRQ5 1243 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 RAB11FIP2Q7L804 512 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 TADA2BQ86TJ2 420 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 SRRM1Q8IYB3 904 aaKnown RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 LINC00301Q8NCQ3 95 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
NUP54-211ENST00000512151 SPATA20Q8TB22 786 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 CCDC127Q96BQ5 260 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 PLD4Q96BZ4 506 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 MYEOVQ96EZ4 313 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 CALN1Q9BXU9 219 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 EPB41L5Q9HCM4 733 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 FOXJ2Q9P0K8 574 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 KLF15Q9UIH9 416 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 STOML2Q9UJZ1 356 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 SARDHQ9UL12 918 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms