RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 IPO9Q96P70 1041 aaKnown RBP19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 ZSCAN16Q9H4T2 348 aaPredicted RBP19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 POLR1BQ9H9Y6 1135 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 TMEM8AQ9HCN3 771 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 ABCC13Q9NSE7 274 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 EXOC1Q9NV70 894 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 TRAF3IP3Q9Y228 551 aa19.68■□□□□ 0.74
HMGCS1-206ENST00000511774 IRAK2O43187 625 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 IL1BP01584 269 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 SRPRAP08240 638 aaKnown RBP19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 DAB2P98082 770 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 SRSF1Q07955 248 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■■■■□ 23.2
HMGCS1-206ENST00000511774 EEF2KMTQ96G04 330 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 FCRL2Q96LA5 508 aaPredicted RBP19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 TRIM4Q9C037 500 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 XPO7Q9UIA9 1087 aaKnown RBP19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 TEX15Q9BXT5 2789 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 AHCTF1Q8WYP5 2266 aa19.67■□□□□ 0.74
HMGCS1-206ENST00000511774 PLRG1O43660 514 aaKnown RBP19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 ACTN4O43707 911 aaKnown RBP19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 YEATS4O95619 227 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 CKMT1AP12532 417 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 LCP1P13796 627 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 SLC11A2P49281 568 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 ERVPABLB-1P60509 514 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 SKOR1P84550 965 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 ECT2LQ008S8 904 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 BST2Q10589 180 aaKnown RBP19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 DCAF6Q58WW2 860 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 RESP18Q5W5W9 173 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 PRPF39Q86UA1 669 aaKnown RBP19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 FAM186BQ8IYM0 893 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 FRS2Q8WU20 508 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 PAGE5Q96GU1 130 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 MYOCQ99972 504 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 IRX2Q9BZI1 471 aaPredicted RBP19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 OSBPL2Q9H1P3 480 aa19.66■□□□□ 0.74
HMGCS1-206ENST00000511774 K7ENP7 123 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 LUC7L3O95232 432 aaKnown RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 FYNP06241 537 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 NR2F2P24468 414 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 RGS7P49802 495 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 TBX4P57082 545 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 MCCD1P59942 119 aaPredicted RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 MS4A13Q5J8X5 152 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 AGBL4Q5VU57 503 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 NUGGCQ68CJ6 796 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 INO80CQ6PI98 192 aaPredicted RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 TRIM69Q86WT6 500 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 UNC45BQ8IWX7 931 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 SIX6OS1Q8N1H7 587 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 SCML4Q8N228 414 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 TMEM145Q8NBT3 493 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 KCTD13Q8WZ19 329 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 AZIN2Q96A70 460 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 PRR11Q96HE9 360 aaPredicted RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 DEPDC7Q96QD5 511 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 DPH1Q9BZG8 443 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 TPX2Q9ULW0 747 aaKnown RBP19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 PCDHA7Q9UN72 937 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 LRRK2Q5S007 2527 aa19.65■□□□□ 0.74
HMGCS1-206ENST00000511774 O00370 1275 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 CASC3O15234 703 aaKnown RBP19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 SLC8A3P57103 927 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 TAS2R38P59533 333 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 CNTN1Q12860 1018 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 OVGP1Q12889 678 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 CDH18Q13634 790 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 ELAVL3Q14576 367 aaKnown RBP19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 STAT4Q14765 748 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 KRT39Q6A163 491 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 PMF1Q6P1K2 205 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 LSMEM2Q8N112 164 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 EXD3Q8N9H8 876 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 KLK6Q92876 244 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 APOLD1Q96LR9 279 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 NOX5Q96PH1 765 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 ZSWIM1Q9BR11 485 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 CNGB3Q9NQW8 809 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 SATB2Q9UPW6 733 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 DMTF1Q9Y222 760 aa19.64■□□□□ 0.73
HMGCS1-206ENST00000511774 CALUO43852 315 aaPredicted RBP19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 PIAS2O75928 621 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 PRLRP16471 622 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 KCNMA1Q12791 1236 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 NFIL3Q16649 462 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 SGO2Q562F6 1265 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 PRICKLE2Q7Z3G6 844 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 ZNF557Q8N988 423 aaPredicted RBP19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 CCDC150Q8NCX0 1101 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 TFAP2BQ92481 460 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 KLHDC7BQ96G42 594 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 SLC39A13Q96H72 371 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 DNAI2Q9GZS0 605 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 FZD3Q9NPG1 666 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 RAB20Q9NX57 234 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 MAPK8IP1Q9UQF2 711 aa19.63■□□□□ 0.73
HMGCS1-206ENST00000511774 PRAMEF26H0Y7S4 382 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms