RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 MON1AQ86VX9 555 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 ANKS4BQ8N8V4 417 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 BANPQ8N9N5 519 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 AZIN2Q96A70 460 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 ZNF669Q96BR6 464 aaPredicted RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 OXNAD1Q96HP4 312 aaPredicted RBP15.24■□□□□ 0.03
PHF3-209ENST00000509330 SENP1Q9P0U3 644 aa15.24■□□□□ 0.03
PHF3-209ENST00000509330 PTPRDP23468 1912 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 CCDC195A0A1B0GUA6 201 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 SLC12A8A0AV02 714 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 ALFQ53S48 1182 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 C4orf22Q6V702 233 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 ARHGAP12Q8IWW6 846 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 IPMKQ8NFU5 416 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 PTPRN2Q92932 1015 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 TBC1D31Q96DN5 1066 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 MFSD3Q96ES6 412 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 SERPINB11Q96P15 392 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 FRMD8Q9BZ67 464 aaPredicted RBP15.23■□□□□ 0.03
PHF3-209ENST00000509330 CAPN7Q9Y6W3 813 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 MYO16Q9Y6X6 1858 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 SPAG6O75602 509 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 NEBLO76041 1014 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 DNAJB2P25686 324 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 OR1D2P34982 312 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 PGGT1BP53609 377 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 MAXP61244 160 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 PCSK7Q16549 785 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 TTC39BQ5VTQ0 682 aaPredicted RBP15.23■□□□□ 0.03
PHF3-209ENST00000509330 SPATA21Q7Z572 469 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 ZNF778Q96MU6 729 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 FCRL3Q96P31 734 aaPredicted RBP15.23■□□□□ 0.03
PHF3-209ENST00000509330 KLHL5Q96PQ7 755 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 TTPALQ9BTX7 342 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 IQCGQ9H095 443 aaKnown RBP15.23■□□□□ 0.03
PHF3-209ENST00000509330 PHTF1Q9UMS5 762 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 SCML2Q9UQR0 700 aa15.23■□□□□ 0.03
PHF3-209ENST00000509330 CCNB1P14635 433 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 PRKCHP24723 683 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 CA8P35219 290 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 HCAR3P49019 387 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 ALDH7A1P49419 539 aaKnown RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 RMDN2Q96LZ7 410 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 PAK6Q9NQU5 681 aaPredicted RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 CHRAC1Q9NRG0 131 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 IGSF9Q9P2J2 1179 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 HMX2A2RU54 273 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 COPEO14579 308 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 TRDMT1O14717 391 aaKnown RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 PMPCBO75439 489 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 KRT37O76014 449 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 SNRPAP09012 282 aaKnown RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 FGFR3P22607 806 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 EIF4EBP2Q13542 120 aaPredicted RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 KIAA1841Q6NSI8 718 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 RASSF3Q86WH2 238 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 PABPC5Q96DU9 382 aaKnown RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 MYEOVQ96EZ4 313 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 FUBP3Q96I24 572 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHF3-209ENST00000509330 OSBPL2Q9H1P3 480 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 GBA3Q9H227 469 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 FBXO44Q9H4M3 255 aa15.22■□□□□ 0.03
PHF3-209ENST00000509330 USP15Q9Y4E8 981 aaPredicted RBP15.22■□□□□ 0.03
PHF3-209ENST00000509330 PAPOLAP51003 745 aaKnown RBP15.21■□□□□ 0.03
PHF3-209ENST00000509330 ITKQ08881 620 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 BRMS1LQ5PSV4 323 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 CFAP52Q8N1V2 620 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 ARMC2Q8NEN0 867 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 LRRC39Q96DD0 335 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 SRPK1Q96SB4 655 aaKnown RBP15.21■□□□□ 0.03
PHF3-209ENST00000509330 AGAP2Q99490 1192 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 MARCH2Q9P0N8 246 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 KCNU1A8MYU2 1149 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 H0YHG0 523 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 AP2A1O95782 977 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 ATF6P18850 670 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 KCNQ1P51787 676 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 POU6F1Q14863 301 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 NDUFAF2Q8N183 169 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 FBXO22Q8NEZ5 403 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 ZNF75CPQ92670 426 aaPredicted RBP15.21■□□□□ 0.03
PHF3-209ENST00000509330 TEKT5Q96M29 485 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 HAPLN3Q96S86 360 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 TRIM62Q9BVG3 475 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 NACA2Q9H009 215 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 PPCSQ9HAB8 311 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 PRDM5Q9NQX1 630 aaPredicted RBP15.21■□□□□ 0.03
PHF3-209ENST00000509330 ZFATQ9P243 1243 aa15.21■□□□□ 0.03
PHF3-209ENST00000509330 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.02
PHF3-209ENST00000509330 FAM159BA6NKW6 160 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 NCAM2O15394 837 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 TSHRP16473 764 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 BGNP21810 368 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 ETFBP38117 255 aa15.21■□□□□ 0.02
PHF3-209ENST00000509330 MRPL58Q14197 206 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms