RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ACBD5Q5T8D3 534 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 AFMIDQ63HM1 303 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 RFX8Q6ZV50 586 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 DAAM2Q86T65 1068 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 ARHGAP12Q8IWW6 846 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 PQLC3Q8N755 202 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 FLCNQ8NFG4 579 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 OR7D4Q8NG98 312 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 PCDH19Q8TAB3 1148 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 USP33Q8TEY7 942 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 FAF2Q96CS3 445 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 MYO19Q96H55 970 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 SHDQ96IW2 340 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 MRGPRX3Q96LB0 322 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 ACOX2Q99424 681 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 OSBPL6Q9BZF3 934 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 LMAN1LQ9HAT1 526 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 LCMT1Q9UIC8 334 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 GGA2Q9UJY4 613 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 PACSIN2Q9UNF0 486 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-220ENST00000508715 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
PTPN20-220ENST00000508715 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 H0Y626 953 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 EEF2KO00418 725 aaKnown RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 KRT86O43790 486 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 SPOPO43791 374 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ADAM23O75077 832 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ZMPSTE24O75844 475 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 CD160O95971 181 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 APODP05090 189 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 KRT7P08729 469 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 DRD1P21728 446 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 GLDCP23378 1020 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 CTNNA2P26232 953 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 CTNNA1P35221 906 aaKnown RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ACVRL1P37023 503 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 TPI1P60174 286 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 CDH18Q13634 790 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 PITRM1Q5JRX3 1037 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 DCAF12L1Q5VU92 463 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 RNF219Q5W0B1 726 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 EGFLAMQ63HQ2 1017 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 MBLAC2Q68D91 279 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 RWDD4Q6NW29 188 aaKnown RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 MFSD7Q6UXD7 560 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 LRRC31Q6UY01 552 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 RHOT1Q8IXI2 618 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ABCA7Q8IZY2 2146 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 C17orf53Q8N3J3 647 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 KIAA1524Q8TCG1 905 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 TTC17Q96AE7 1141 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 NELL2Q99435 816 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 EPAS1Q99814 870 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 FEM1AQ9BSK4 669 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 CD248Q9HCU0 757 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ELOVL2Q9NXB9 296 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 TRMT1Q9NXH9 659 aaKnown RBP10.62□□□□□ -0.71
PTPN20-220ENST00000508715 DNAI1Q9UI46 699 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 PCDHA3Q9Y5H8 950 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ACTL7AQ9Y615 435 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 SPAG17Q6Q759 2223 aa10.62□□□□□ -0.71
PTPN20-220ENST00000508715 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 ILVBLA1L0T0 632 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 TBC1D3BA6NDS4 549 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 WASH3PC4AMC7 463 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 DLL1O00548 723 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 FANCGO15287 622 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 PSTPIP1O43586 416 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 SNAP91O60641 907 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 GPR37L1O60883 481 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 RNF40O75150 1001 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 MT-CO1P00395 513 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 DESP17661 470 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 OR1E1P30953 314 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 CDKN2BP42772 138 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 TNFRSF4P43489 277 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 MAPKAPK2P49137 400 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 CLCN5P51795 746 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 SEC13P55735 322 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 AMPD2Q01433 879 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 GRSF1Q12849 480 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 SLC10A2Q12908 348 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 ZNF177Q13360 481 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 ENPP2Q13822 863 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 LLGL1Q15334 1064 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 DGKKQ5KSL6 1271 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 C1orf228Q6PIY5 440 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 SETD3Q86TU7 594 aaPredicted RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 SUGP1Q8IWZ8 645 aaKnown RBP10.61□□□□□ -0.71
PTPN20-220ENST00000508715 KATNAL2Q8IYT4 538 aa10.61□□□□□ -0.71
PTPN20-220ENST00000508715 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms