RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CNGB3Q9NQW8 809 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 EXOC1Q9NV70 894 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 ERVW-1Q9UQF0 538 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 ITPR3Q14573 2671 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3DA0A087WVF3 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3IA0A087WXS9 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3EA0A087X179 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3KA0A087X1G2 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TYW5A2RUC4 315 aaKnown RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3FA6NER0 549 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TTC34A8MYJ7 566 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3LB9A6J9 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TRIM38O00635 465 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 SLC7A4O43246 635 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 CALUO43852 315 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 LZTS3O60299 673 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 MPOP05164 745 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3HP0C7X1 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 KRT13P13646 458 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 PDIA4P13667 645 aaKnown RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 MZF1P28698 734 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 GTF2H1P32780 548 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 DRD3P35462 400 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 PSMD8P48556 350 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 GABREP78334 506 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 VAC14Q08AM6 782 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 ELAVL3Q14576 367 aaKnown RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 C4orf17Q53FE4 359 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3GQ6DHY5 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 HIST2H2BCQ6DN03 193 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 NADSYN1Q6IA69 706 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3CQ6IPX1 549 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 IGF2-ASQ6U949 168 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TBC1D3Q8IZP1 549 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 STK40Q8N2I9 435 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 SLC25A45Q8N413 288 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 KCNE4Q8WWG9 221 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 KCTD13Q8WZ19 329 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 PTPRN2Q92932 1015 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TATDN2Q93075 761 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 PRICKLE1Q96MT3 831 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF396Q96N95 335 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 DEPDC7Q96QD5 511 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 DDX50Q9BQ39 737 aaKnown RBP9.72□□□□□ -0.85
NEDD9-211ENST00000508546 POLR1BQ9H9Y6 1135 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 ASCL3Q9NQ33 180 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 STIM2Q9P246 746 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 CYTH4Q9UIA0 394 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 TSPAN16Q9UKR8 245 aa9.72□□□□□ -0.85
NEDD9-211ENST00000508546 ICE1Q9Y2F5 2266 aa9.71□□□□□ -0.85
NEDD9-211ENST00000508546 PRAMEF26H0Y7S4 382 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 KLK10O43240 276 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 PLRG1O43660 514 aaKnown RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 OPA1O60313 960 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 RNGTTO60942 597 aaKnown RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 LUC7L3O95232 432 aaKnown RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 MOCS3O95396 460 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 GP1BAP07359 652 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 CKMT1AP12532 417 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 NR2F2P24468 414 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 DAOAP59103 153 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 RPS24P62847 133 aaKnown RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 DAB2P98082 770 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 ECT2LQ008S8 904 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 CDH18Q13634 790 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 UBAP2LQ14157 1087 aaKnown RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 STAT4Q14765 748 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 HS1BP3Q53T59 392 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 SGO2Q562F6 1265 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 FSCBQ5H9T9 825 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 KRT39Q6A163 491 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 ATG14Q6ZNE5 492 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 CCDC117Q8IWD4 279 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-211ENST00000508546 FAM186BQ8IYM0 893 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 CEP57L1Q8IYX8 460 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 SIX6OS1Q8N1H7 587 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 IRGQQ8WZA9 623 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 SEMA4DQ92854 862 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 THSD1Q9NS62 852 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 HESX1Q9UBX0 185 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
NEDD9-211ENST00000508546 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 A0A1B0GVM2 712 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 K7ENP7 123 aa9.7□□□□□ -0.86
NEDD9-211ENST00000508546 SDC3O75056 442 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms