RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FAM47EQ6ZV65 393 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM59Q8IWR1 403 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 COLGALT2Q8IYK4 626 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 C10orf53Q8N6V4 93 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PLD4Q96BZ4 506 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM209Q96SK2 561 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SMAD5Q99717 465 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EFHD1Q9BUP0 239 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 UBXN6Q9BZV1 441 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TDRKHQ9Y2W6 561 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DTNAQ9Y4J8 743 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MCM3APO60318 1980 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SPTBN2O15020 2390 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PTPRFP10586 1907 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 IGKV6D-41A0A0C4DH26 115 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GTPBP10A4D1E9 387 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GOLGA8MH3BSY2 632 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NBNO60934 754 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RNF40O75150 1001 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 H2AFYO75367 372 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TIPRLO75663 272 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GRAP2O75791 330 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HLA-DRAP01903 254 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TUBB4AP04350 444 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NFICP08651 508 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PSMC3P17980 439 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 OR1E1P30953 314 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RFX3P48380 749 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RGS4P49798 205 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FXR1P51114 621 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RENBPP51606 427 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ATP11AP98196 1134 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 GRIN1Q05586 938 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LAMB3Q13751 1172 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 AGERQ15109 404 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PTPN21Q16825 1174 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KIF19Q2TAC6 998 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LRIT3Q3SXY7 679 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ARSJQ5FYB0 599 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM68Q6AZZ1 485 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PTRHD1Q6GMV3 140 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJB7Q7Z6W7 309 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D1Q86TI0 1168 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DHX40Q8IX18 779 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 STX19Q8N4C7 294 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MRPL43Q8N983 215 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 C1orf131Q8NDD1 294 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FOXJ1Q92949 421 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CLP1Q92989 425 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC46Q96FV0 321 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM176AQ96HP8 235 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HAPLN3Q96S86 360 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 IL12RB2Q99665 862 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CARD6Q9BX69 1037 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PRKD2Q9BZL6 878 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DHX35Q9H5Z1 703 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PDE11AQ9HCR9 933 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ERVK-5Q9HDB9 667 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NFE2L3Q9Y4A8 694 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SCN5AQ14524 2016 aa3.03□□□□□ -1.93
NEDD4-208ENST00000508342 DNAJC25-GNG10A0A024R161 153 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 B4DGG1 531 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MAFKO60675 156 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NDUFS3O75489 264 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLITRK3O94933 977 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CCNYL3P0C7X3 344 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 IDO1P14902 403 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ARF4P18085 180 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MX2P20592 715 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ITGAXP20702 1163 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC12A3P55017 1021 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SNRPD1P62314 119 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SRSF11Q05519 484 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TGM3Q08188 693 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RALGDSQ12967 914 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SWI5Q1ZZU3 235 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CLLU1OSQ5K130 101 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 AHI1Q8N157 1196 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FBXL6Q8N531 539 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TADA1Q96BN2 335 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 C16orf70Q9BSU1 422 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PRRG4Q9BZD6 226 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KLC2Q9H0B6 622 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM8AQ9HCN3 771 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TCF7L2Q9NQB0 619 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PCMTD2Q9NV79 361 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PKD2L2Q9NZM6 624 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 STOML1Q9UBI4 398 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SUSD2Q9UGT4 822 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PNMA8BQ9ULN7 279 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF711Q9Y462 761 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 A8MU76 341 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 C5orf58C9J3I9 102 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 POC1B-GALNT4F8VUJ3 575 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RGS16O15492 202 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BUB1BO60566 1050 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CNOT4O95628 575 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MSH3P20585 1137 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GTF2H1P32780 548 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms