RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ISCUQ9H1K1 167 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 PLAC1Q9HBJ0 212 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 PNMA2Q9UL42 364 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 MAN2B2Q9Y2E5 1009 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 LRCH1Q9Y2L9 728 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 NBNO60934 754 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 PPP1R3DO95685 299 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 CPA1P15085 419 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 SLC8A1P32418 973 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 AGTR2P50052 363 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 POU5F1BQ06416 359 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 BIRC3Q13489 604 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 TRIM14Q14142 442 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 ELF2Q15723 593 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 PDCD2Q16342 344 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 ANXA2RQ3ZCQ2 193 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 WDR78Q5VTH9 848 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 CCDC144NLQ6NUI1 221 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 KIAA0408Q6ZU52 694 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 LAS2Q8IYD9 372 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 CDT1Q9H211 546 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 AS3MTQ9HBK9 375 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 FBXO28Q9NVF7 368 aa4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 MORC2Q9Y6X9 1032 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-209ENST00000508304 hCG_1642624A0A1W2PR95 340 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 OR6C75A6NL08 312 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 SMTNL1A8MU46 457 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 BTBD18B2RXH4 712 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 INAFM1C9JVW0 142 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 RHODO00212 210 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 CGAP01215 116 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 KLKB1P03952 638 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 SLC5A1P13866 664 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 EGR1P18146 543 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 TCEA1P23193 301 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 PCYT1AP49585 367 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 MAPKAPK3Q16644 382 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 ARHGAP15Q53QZ3 475 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 Q5PR19 223 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 RAP1GAP2Q684P5 730 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 ERAP2Q6P179 960 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 XRRA1Q6P2D8 792 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 ACSM6Q6P461 480 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 LRIG3Q6UXM1 1119 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 CTU1Q7Z7A3 348 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 RASGRP3Q8IV61 690 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 FAM47BQ8NA70 645 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 POF1BQ8WVV4 589 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 BRI3BPQ8WY22 251 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 ZNF566Q969W8 418 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 RGL1Q9NZL6 768 aa4.75□□□□□ -1.65
TRAPPC13-209ENST00000508304 ABHD14A-ACY1A0A1B0GW23 586 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 NDST3O95803 873 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 UMODP07911 640 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 GABRB3P28472 473 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 CIITAP33076 1130 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 RASSF2P50749 326 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 PMS2P11Q13670 270 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 CSHL1Q14406 222 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 FAM76BQ5HYJ3 339 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 FAM209BQ5JX69 171 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 KIAA1755Q5JYT7 1200 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 HIBCHQ6NVY1 386 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 GPSM1Q86YR5 675 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 GLMPQ8WWB7 406 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 CDCP1Q9H5V8 836 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 HELLSQ9NRZ9 838 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 CA14Q9ULX7 337 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 PTGDR2Q9Y5Y4 395 aa4.74□□□□□ -1.65
TRAPPC13-209ENST00000508304 A0A1B0GVT2 93 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 OR2W5A6NFC9 320 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 BECN2A8MW95 431 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 RGS14O43566 566 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 SPRY3O43610 288 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 FGF18O76093 207 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 RFPL3SP0C7P2 107 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 HARSP12081 509 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 PECAM1P16284 738 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 CD53P19397 219 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 TNFSF4P23510 183 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 LMOD3Q0VAK6 560 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 GPS2Q13227 327 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 TMEM95Q3KNT9 176 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 C9orf57Q5W0N0 161 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 CCDC70Q6NSX1 233 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 SPSB3Q6PJ21 355 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 Q6ZTK2 550 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 SRFBP1Q8NEF9 429 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 MAF1Q9H063 256 aa4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 KRCC1Q9NPI7 259 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-209ENST00000508304 PLEKHB1Q9UF11 243 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms