RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZP2Q05996 745 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 FSCBQ5H9T9 825 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 AFMIDQ63HM1 303 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
RNF4-208ENST00000507247 C12orf40Q86WS4 652 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 MFN1Q8IWA4 741 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 CCDC33Q8N5R6 958 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 TTC8Q8TAM2 541 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 NXPE3Q969Y0 559 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 CELF6Q96J87 481 aaKnown RBP14.57□□□□□ -0.08
RNF4-208ENST00000507247 FAM118BQ9BPY3 351 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 RETREG1Q9H6L5 497 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 BRD9Q9H8M2 597 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 PRDM16Q9HAZ2 1276 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 DTLQ9NZJ0 730 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 TBC1D30Q9Y2I9 924 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 MRFAP1Q9Y605 127 aa14.57□□□□□ -0.08
RNF4-208ENST00000507247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 H0Y626 953 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 TNFRSF10AO00220 468 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 APOC2P02655 101 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 SERPINB6P35237 376 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 OTUD4Q01804 1114 aaKnown RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 ZNF177Q13360 481 aaPredicted RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 ASTLQ6HA08 431 aaPredicted RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 UMODL1-AS1Q8N2C9 162 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 CPA6Q8N4T0 437 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 ACTL9Q8TC94 416 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 LRRN4Q8WUT4 740 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 CHFRQ96EP1 664 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 LMLNQ96KR4 655 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 SLC39A8Q9C0K1 460 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 LRRC19Q9H756 370 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 RRAGDQ9NQL2 400 aaPredicted RBP14.56□□□□□ -0.08
RNF4-208ENST00000507247 PRKAG3Q9UGI9 489 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 HEY1Q9Y5J3 304 aa14.56□□□□□ -0.08
RNF4-208ENST00000507247 A0A0D9SEW6 157 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 TRIM24O15164 1050 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 NARSO43776 548 aaKnown RBP14.55□□□□□ -0.08
RNF4-208ENST00000507247 CACNG3O60359 315 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 RHOCP08134 193 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 GJA4P35212 333 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 NUMBP49757 651 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 LMAN2Q12907 356 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 CDH18Q13634 790 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 NOMO1Q15155 1222 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 CCDC181Q5TID7 509 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 NAIF1Q69YI7 327 aaPredicted RBP14.55□□□□□ -0.08
RNF4-208ENST00000507247 SETD3Q86TU7 594 aaPredicted RBP14.55□□□□□ -0.08
RNF4-208ENST00000507247 ETFBKMTQ8IXQ9 262 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 LZTR1Q8N653 840 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 PRELID2Q8N945 189 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 OR7D4Q8NG98 312 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 FIBINQ8TAL6 211 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 C1orf54Q8WWF1 131 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 ATG4AQ8WYN0 398 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 HMCESQ96FZ2 354 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 OLFM3Q96PB7 478 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 UHRF1Q96T88 793 aaPredicted RBP14.55□□□□□ -0.08
RNF4-208ENST00000507247 AP1M1Q9BXS5 423 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 FBXO10Q9UK96 956 aa14.55□□□□□ -0.08
RNF4-208ENST00000507247 ILVBLA1L0T0 632 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 RASA4BC9J798 803 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 RASA4O43374 803 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 RAMP2O60895 175 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 MZF1P28698 734 aaPredicted RBP14.54□□□□□ -0.08
RNF4-208ENST00000507247 HLA-FP30511 346 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 CD70P32970 193 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 ACVRL1P37023 503 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 OPRD1P41143 372 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 CSKP41240 450 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 PAFAH1B1P43034 410 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 SLC6A11P48066 632 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 SOX9P48436 509 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 NDST2P52849 883 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 GNA12Q03113 381 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 GALNT2Q10471 571 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 NR1H3Q13133 447 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 WHAMMP3Q1A5X7 153 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 ITPRIPL2Q3MIP1 535 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 C6orf118Q5T5N4 469 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 RNF219Q5W0B1 726 aaPredicted RBP14.54□□□□□ -0.08
RNF4-208ENST00000507247 ARHGAP36Q6ZRI8 547 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 B4GALNT4Q76KP1 1039 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 MAIP1Q8WWC4 291 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 P3H4Q92791 437 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
RNF4-208ENST00000507247 ALG14Q96F25 216 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 NAP1L3Q99457 506 aaPredicted RBP14.54□□□□□ -0.08
RNF4-208ENST00000507247 DONSONQ9NYP3 566 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 OR51B4Q9Y5P0 310 aa14.54□□□□□ -0.08
RNF4-208ENST00000507247 DFFAO00273 331 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 KRIT1O00522 736 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 TULP3O75386 442 aa14.53□□□□□ -0.08
RNF4-208ENST00000507247 CISD3P0C7P0 127 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms