RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 GNASQ5JWF2 1037 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 TLDC1Q6P9B6 456 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 LBX2Q6XYB7 198 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 ARHGAP36Q6ZRI8 547 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 TRIML2Q8N7C3 387 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 SCAMP5Q8TAC9 235 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 PARK7Q99497 189 aaKnown RBP9.81□□□□□ -0.84
PHF3-208ENST00000506783 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 TKTL2Q9H0I9 626 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 KCNK13Q9HB14 408 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 USP29Q9HBJ7 922 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 POPDC2Q9HBU9 364 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 SNX15Q9NRS6 342 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 ABI2Q9NYB9 513 aaPredicted RBP9.81□□□□□ -0.84
PHF3-208ENST00000506783 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 HEMK1Q9Y5R4 338 aaPredicted RBP9.81□□□□□ -0.84
PHF3-208ENST00000506783 WDR87Q6ZQQ6 2873 aa9.81□□□□□ -0.84
PHF3-208ENST00000506783 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 MYBPHLA2RUH7 354 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 ERI2A8K979 691 aaKnown RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 E7ENQ6 273 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 TREHO43280 583 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 PFDN1O60925 122 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SH3BGRLO75368 114 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 PSMC3P17980 439 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 NR4A1P22736 598 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 EEF1B2P24534 225 aaKnown RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 BRCC3P46736 316 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 MPP3Q13368 585 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 LAMC2Q13753 1193 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 BLMHQ13867 455 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CLEC6AQ6EIG7 209 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 KRT80Q6KB66 452 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 PACS1Q6VY07 963 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SATL1Q86VE3 508 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 RDM1Q8NG50 284 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 OR52K2Q8NGK3 314 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CDC26Q8NHZ8 85 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SKA2Q8WVK7 121 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 ZNF518BQ9C0D4 1074 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CCDC134Q9H6E4 229 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 RFPL1O75677 317 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 C2P06681 752 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 BPGMP07738 259 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 NMBRP28336 390 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SEMA5AQ13591 1074 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 TSTA3Q13630 321 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 PRKD1Q15139 912 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
PHF3-208ENST00000506783 CIR1Q86X95 450 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 NT5DC4Q86YG4 428 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 ZNF567Q8N184 647 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CHST13Q8NET6 341 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 OR9I1Q8NGQ6 314 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 BLOC1S5Q8TDH9 187 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 FICDQ9BVA6 458 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 GCOM2Q9BZD3 368 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 TCF7L2Q9NQB0 619 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 PDLIM7Q9NR12 457 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 PPP2R3BQ9Y5P8 575 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 RNF103-CHMP3A0A140T963 221 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 F8W810 466 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 NRP1O14786 923 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 AKAP10O43572 662 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CLIC3O95833 236 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CCNB1P14635 433 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 TKTP29401 623 aaKnown RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 GSTT1P30711 240 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 GGT5P36269 586 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 GRIK1P39086 918 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SEMG2Q02383 582 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 ZNF470Q6ECI4 717 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 CMASQ8NFW8 434 aaPredicted RBP9.8□□□□□ -0.84
PHF3-208ENST00000506783 MAPK15Q8TD08 544 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 THAP1Q9NVV9 213 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 SLC2A6Q9UGQ3 507 aa9.8□□□□□ -0.84
PHF3-208ENST00000506783 PGK1P00558 417 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ALDOAP04075 364 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 JUNP05412 331 aaKnown RBP9.79□□□□□ -0.84
PHF3-208ENST00000506783 ABHD2P08910 425 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 ITGB6P18564 788 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 IL4RP24394 825 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 RIPK1Q13546 671 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 DBN1Q16643 649 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 PLA2G4EQ3MJ16 856 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 AGKQ53H12 422 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 SFT2D3Q587I9 215 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 SGO1Q5FBB7 561 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 FSTL4Q6MZW2 842 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 GK5Q6ZS86 529 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 KCNMB4Q86W47 210 aa9.79□□□□□ -0.84
PHF3-208ENST00000506783 MIER2Q8N344 545 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms