RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NDUFV2P19404 249 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 OR1E1P30953 314 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 HOXC13P31276 330 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
SNCA-209ENST00000506244 HTR7P34969 479 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 ETFBP38117 255 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 IRAK1P51617 712 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 ZNF75DP51815 510 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 ADKP55263 362 aaKnown RBP17.15■□□□□ 0.34
SNCA-209ENST00000506244 KRT83P78385 493 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 OGDHQ02218 1023 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 TBX2Q13207 712 aaPredicted RBP17.15■□□□□ 0.34
SNCA-209ENST00000506244 SRSF5Q13243 272 aaKnown RBP17.15■□□□□ 0.34
SNCA-209ENST00000506244 ACAP1Q15027 740 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 ALFQ53S48 1182 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 MANEALQ5VSG8 457 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 DNAAF5Q86Y56 855 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
SNCA-209ENST00000506244 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 FEM1AQ9BSK4 669 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 THAP2Q9H0W7 228 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 MPP6Q9NZW5 540 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 LCMT1Q9UIC8 334 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 ERVW-1Q9UQF0 538 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 DMDP11532 3685 aa17.15■□□□□ 0.34
SNCA-209ENST00000506244 PRPSAP2O60256 369 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 RHOBTB1O94844 696 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 CYP1A2P05177 515 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 RHOQP17081 205 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 L1CAMP32004 1257 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 P2RY2P41231 377 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 MAPKAPK2P49137 400 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 VASPP50552 380 aaPredicted RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 CAMK2GQ13555 558 aaPredicted RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 RWDD4Q6NW29 188 aaKnown RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 KIAA1324Q6UXG2 1013 aaKnown RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 DCAF4L2Q8NA75 395 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 OR2T3Q8NH03 318 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 PRCCQ92733 491 aaPredicted RBP17.14■□□□□ 0.33
SNCA-209ENST00000506244 LOXL4Q96JB6 756 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 MRGPRX1Q96LB2 322 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 NUP85Q9BW27 656 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 DONSONQ9NYP3 566 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 FZD10Q9ULW2 581 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 EML5Q05BV3 1969 aa17.14■□□□□ 0.33
SNCA-209ENST00000506244 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 EDDM13A0A1B0GTR0 161 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 ILVBLA1L0T0 632 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 AP5Z1O43299 807 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 LRIG2O94898 1065 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 HLA-EP13747 358 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 MZF1P28698 734 aaPredicted RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 PCK1P35558 622 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 ZNF135P52742 658 aaPredicted RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 ZNF252P-AS1Q0IIN9 211 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 PIGHQ14442 188 aaPredicted RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 HNRNPA1L2Q32P51 320 aaKnown RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 METTL3Q86U44 580 aaKnown RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 SIPA1Q96FS4 1042 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 ZC3H10Q96K80 434 aaKnown RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
SNCA-209ENST00000506244 TMEM248Q9NWD8 314 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 UVRAGQ9P2Y5 699 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 IP6K2Q9UHH9 426 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 ANAPC7Q9UJX3 599 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 AP4E1Q9UPM8 1137 aa17.13■□□□□ 0.33
SNCA-209ENST00000506244 SPAG17Q6Q759 2223 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 RNASEH1O60930 286 aaKnown RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 RETP07949 1114 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 ACADMP11310 421 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 GALCP54803 685 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 LPAL2Q16609 132 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 ASTE1Q2TB18 679 aaPredicted RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 PLK5Q496M5 336 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 ZNF776Q68DI1 518 aaPredicted RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 KBTBD6Q86V97 674 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 TMPRSS6Q8IU80 811 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 FAM160A2Q8N612 972 aaPredicted RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 ZNF564Q8TBZ8 553 aaPredicted RBP17.12■□□□□ 0.33
SNCA-209ENST00000506244 ALG14Q96F25 216 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 MYO19Q96H55 970 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 MRGPRX3Q96LB0 322 aa17.12■□□□□ 0.33
SNCA-209ENST00000506244 MKRN2Q9H000 416 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms