RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SEMA3AQ14563 771 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 BTBD16Q32M84 506 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC58Q4VC31 144 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SWSAP1Q6NVH7 229 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RWDD4Q6NW29 188 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SHISA2Q6UWI4 295 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SMIM5Q71RC9 77 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DCP2Q8IU60 420 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TMTC1Q8IUR5 882 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CROCCP3Q8IVE0 287 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF565Q8N9K5 539 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 LENG9Q96B70 501 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KATNAL1Q9BW62 490 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 C1orf43Q9BWL3 253 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SPZ1Q9BXG8 430 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TRIM5Q9C035 493 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 FHDC1Q9C0D6 1143 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TRPV6Q9H1D0 765 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MRPS18AQ9NVS2 196 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ENOPH1Q9UHY7 261 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CBLCQ9ULV8 474 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 HPSEQ9Y251 543 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 C1orf232A0A0U1RR37 186 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 PRAMEF25A6NGN4 478 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TTLL8A6PVC2 850 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 RHPN2P1A8MT19 583 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 FAM155AB1AL88 458 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 H3BS24 57 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ADCY3O60266 1144 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TGDSO95455 350 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MAPTP10636 758 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MMP13P45452 471 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 WNT7BP56706 349 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 AP2B1P63010 937 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 AKAP17AQ02040 695 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 CHRNDQ07001 517 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 CD300CQ08708 224 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 FSTL1Q12841 308 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 BAMBIQ13145 260 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 LETM2Q2VYF4 491 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ADCK5Q3MIX3 580 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MAMDC4Q6UXC1 1216 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ACAD11Q709F0 780 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 USP49Q70CQ1 688 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 IKBIPQ70UQ0 350 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 GALNT7Q86SF2 657 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 LINC01465Q8N7H1 131 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 RBBP8NLQ8NC74 664 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 CAGE1Q8TC20 777 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ENKURQ8TC29 256 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 LPGAT1Q92604 370 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 JADE3Q92613 823 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 INPP5DQ92835 1189 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MARC2Q969Z3 335 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ALKBH8Q96BT7 664 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 DGCR14Q96DF8 476 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 COG8Q96MW5 612 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MTMR9Q96QG7 549 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 WACQ9BTA9 647 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 BTBD2Q9BX70 525 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF696Q9H7X3 374 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 OXSMQ9NWU1 459 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 UCKL1Q9NWZ5 548 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TEKT2Q9UIF3 430 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ATPIF1Q9UII2 106 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 DENND2AQ9ULE3 1009 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 A0A0G2JMP0 313 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 hCG_2039718K7EN88 272 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MUSKO15146 869 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 NKRFO15226 690 aaKnown RBP eCLIP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TLR2O60603 784 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 HSF2BPO75031 334 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 CRYZL1O95825 349 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 PON1P27169 355 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 KIF5BP33176 963 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TALDO1P37837 337 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 GLRBP48167 497 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 GSSP48637 474 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 HSPA13P48723 471 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 SCNN1GP51170 649 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 NDST1P52848 882 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 FOXO1Q12778 655 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ATP1A4Q13733 1029 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 PDCD1Q15116 288 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 UAP1Q16222 522 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TSTQ16762 297 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ANO6Q4KMQ2 910 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 NPSR1Q6W5P4 371 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC121Q6ZUS5 278 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 GPRIN3Q6ZVF9 776 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 LONP2Q86WA8 852 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 TBC1D10CQ8IV04 446 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MIER2Q8N344 545 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 SCLYQ96I15 445 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 PUS7LQ9H0K6 701 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ASCC2Q9H1I8 757 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 MRM3Q9HC36 420 aaKnown RBP2.34□□□□□ -2.04
NEDD4-205ENST00000506154 FANCFQ9NPI8 374 aa2.34□□□□□ -2.04
NEDD4-205ENST00000506154 ECHDC1Q9NTX5 307 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms