RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
LINC00616-202ENST00000505874 MED30Q96HR3 178 aa4.42□□□□□ -1.7
LINC00616-202ENST00000505874 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
LINC00616-202ENST00000505874 TP63Q9H3D4 680 aaPredicted RBP4.42□□□□□ -1.7
LINC00616-202ENST00000505874 KRCC1Q9NPI7 259 aaPredicted RBP4.42□□□□□ -1.7
LINC00616-202ENST00000505874 HIF1ANQ9NWT6 349 aa4.42□□□□□ -1.7
LINC00616-202ENST00000505874 NCKIPSDQ9NZQ3 722 aa4.42□□□□□ -1.7
LINC00616-202ENST00000505874 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 AGAP5A6NIR3 686 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 BECN2A8MW95 431 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 KCNJ18B7U540 433 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 TNFRSF6BO95407 300 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 MYL1P05976 194 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 LCKP06239 509 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 CHRNA5P30532 468 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 SLC16A2P36021 539 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 STAT1P42224 750 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 TECP42680 631 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 ENTPD1P49961 510 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 ADPRHP54922 357 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 LTBQ06643 244 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 GPR18Q14330 331 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 GGT6Q6P531 493 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 PDXDC1Q6P996 788 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 FAM217AQ8IXS0 508 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 DCP1BQ8IZD4 617 aaKnown RBP4.41□□□□□ -1.7
LINC00616-202ENST00000505874 STYXQ8WUJ0 223 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 NUDCD2Q8WVJ2 157 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 MEIS3Q99687 375 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 ARNT2Q9HBZ2 717 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
LINC00616-202ENST00000505874 GEMIN8Q9NWZ8 242 aaKnown RBP4.41□□□□□ -1.7
LINC00616-202ENST00000505874 ARL15Q9NXU5 204 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 PLK2Q9NYY3 685 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 MAGED2Q9UNF1 606 aaPredicted RBP4.41□□□□□ -1.7
LINC00616-202ENST00000505874 CNTN6Q9UQ52 1028 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 PTGDR2Q9Y5Y4 395 aa4.41□□□□□ -1.7
LINC00616-202ENST00000505874 TCRBV7S3A2A0A539 114 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 LARGE1O95461 756 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 KLRC2P26717 231 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 POLE2P56282 527 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 TMPRSS3P57727 454 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 ROR2Q01974 943 aaKnown RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 ZBTB16Q05516 673 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 TRAF1Q13077 416 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 SLC4A8Q2Y0W8 1093 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 INO80DQ53TQ3 878 aaPredicted RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 HSP90AB2PQ58FF8 381 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 SLC30A9Q6PML9 568 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 C18orf65Q6ZTR6 163 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 FAM186BQ8IYM0 893 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 CMASQ8NFW8 434 aaPredicted RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 FAM110DQ8TAY7 271 aaPredicted RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 POLDIP3Q9BY77 421 aaKnown RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 PLAC1Q9HBJ0 212 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 SEPSECSQ9HD40 501 aaKnown RBP4.4□□□□□ -1.71
LINC00616-202ENST00000505874 SELENONQ9NZV5 590 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 DTX4Q9Y2E6 619 aa4.4□□□□□ -1.71
LINC00616-202ENST00000505874 MBD3L5A6NJ08 208 aaPredicted RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 INAFM1C9JVW0 142 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 PRC1O43663 620 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 GYS1P13807 737 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 TNFSF8P32971 234 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 PPM1AP35813 382 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 RFX5P48382 616 aaPredicted RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 PCYT1AP49585 367 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 RASSF2P50749 326 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 RCAN1P53805 252 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 RHAGQ02094 409 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 EGR4Q05215 589 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 GPS2Q13227 327 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 CAPRIN2Q6IMN6 1127 aaKnown RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 KIAA1324Q6UXG2 1013 aaKnown RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 MORC1Q86VD1 984 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 IGFN1Q86VF2 1251 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 CADM3Q8N126 398 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 LRRC57Q8N9N7 239 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 ENGASEQ8NFI3 743 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 ELP5Q8TE02 316 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 TMEM41AQ96HV5 264 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 WDR77Q9BQA1 342 aaPredicted RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 FRMD8Q9BZ67 464 aaPredicted RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 DCLK3Q9C098 648 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 BRD8Q9H0E9 1235 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 ARFGAP3Q9NP61 516 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 OBP2BQ9NPH6 170 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 RNF146Q9NTX7 359 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 LIN7CQ9NUP9 197 aaKnown RBP4.39□□□□□ -1.71
LINC00616-202ENST00000505874 LZTS1Q9Y250 596 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 PCDHA10Q9Y5I2 948 aa4.39□□□□□ -1.71
LINC00616-202ENST00000505874 FAM90A18PA6NE21 464 aa4.38□□□□□ -1.71
LINC00616-202ENST00000505874 FAM90A16PA6NEW6 464 aa4.38□□□□□ -1.71
LINC00616-202ENST00000505874 OR6C75A6NL08 312 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms