RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GOLGA8IPA6NC78 632 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 GOLGA8JA6NMD2 632 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 TLR4O00206 839 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SDC3O75056 442 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 GIMD1P0DJR0 217 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 ABCD1P33897 745 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 GNL1P36915 607 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 EPHA4P54764 986 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SRSF6Q13247 344 aaKnown RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 POSTNQ15063 836 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 E2F5Q15329 346 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 ISXQ2M1V0 245 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 ZSCAN23Q3MJ62 389 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 TTC31Q49AM3 519 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 FNDC3BQ53EP0 1204 aaKnown RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 C3orf38Q5JPI3 329 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 ZNF776Q68DI1 518 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 KLHDC10Q6PID8 442 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 DTHD1Q6ZMT9 781 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 USP30Q70CQ3 517 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 DYMQ7RTS9 669 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 GPRIN1Q7Z2K8 1008 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SLC25A45Q8N413 288 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 OR4C6Q8NH72 309 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 CYB5D2Q8WUJ1 264 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 UBE2Q2Q8WVN8 375 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 UBXN4Q92575 508 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SKA1Q96BD8 255 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 CCNL2Q96S94 520 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 SMOQ99835 787 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 CBWD1Q9BRT8 395 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 EPN3Q9H201 632 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 PABPC3Q9H361 631 aaKnown RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 CAAP1Q9H8G2 361 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 NMUR1Q9HB89 426 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 DMAP1Q9NPF5 467 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 COMMD8Q9NX08 183 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SEPT3Q9UH03 358 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 NUDT5Q9UKK9 219 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 SRPK3Q9UPE1 567 aa7.31□□□□□ -1.24
VCAN-206ENST00000505615 GPC6Q9Y625 555 aaPredicted RBP7.31□□□□□ -1.24
VCAN-206ENST00000505615 TRPM6Q9BX84 2022 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 OTOGQ6ZRI0 2925 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FAM47DPA6NHR8 397 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 CYP26A1O43174 497 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 TIMM44O43615 452 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 BEST1O76090 585 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 DNTTP04053 509 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FAM163BP0C2L3 166 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 CKMT1AP12532 417 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 HOXD9P28356 352 aaPredicted RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 HLA-FP30511 346 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 DDIT3P35638 169 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ATP5C1P36542 298 aaKnown RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 DUSP3P51452 185 aaPredicted RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 CCR5P51681 352 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 PPP2CBP62714 309 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 PPP2CAP67775 309 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 DAB2P98082 770 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 GOLGA8FQ08AF8 430 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 GOLGA8DPQ0D2H9 430 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 DHX8Q14562 1220 aaKnown RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 IGFBP7Q16270 282 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 C20orf204Q6ZNR8 217 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ZNF720Q7Z2F6 126 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SFR1Q86XK3 245 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FAM217AQ8IXS0 508 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FUKQ8N0W3 1084 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FAM26EQ8N5C1 309 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 OR6B3Q8NGW1 331 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 OR2T34Q8NGX1 318 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 HVCN1Q96D96 273 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SGF29Q96ES7 293 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SMARCD1Q96GM5 515 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ATXN7L3BQ96GX2 97 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 MYO19Q96H55 970 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ANKRD36BP1Q96IX9 119 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SERAC1Q96JX3 654 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 C8orf76Q96K31 380 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SLC30A3Q99726 388 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 SLC2A11Q9BYW1 496 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 RSPH9Q9H1X1 276 aaPredicted RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 SNX25Q9H3E2 840 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 MTG2Q9H4K7 406 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 TLR8Q9NR97 1041 aaKnown RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.3□□□□□ -1.24
VCAN-206ENST00000505615 UCKL1Q9NWZ5 548 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 FBXL12Q9NXK8 326 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 NOL7Q9UMY1 257 aaKnown RBP7.3□□□□□ -1.24
VCAN-206ENST00000505615 PCDHGA8Q9Y5G5 932 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ENTPD2Q9Y5L3 495 aa7.3□□□□□ -1.24
VCAN-206ENST00000505615 ATP8B3O60423 1300 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 PCNX1Q96RV3 2341 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 A0A1W2PP55 124 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 A0A1W2PQH9 124 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 A8MXQ7 604 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 HHLA1C9JL84 531 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 LATO43561 262 aa7.29□□□□□ -1.24
VCAN-206ENST00000505615 NOBOXO60393 691 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms