RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 COL28A1Q2UY09 1125 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 NELFBQ8WX92 580 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 KAT5Q92993 513 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 RNF34Q969K3 372 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 MYO19Q96H55 970 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SERAC1Q96JX3 654 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC6A18Q96N87 628 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SPAG5Q96R06 1193 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC4A5Q9BY07 1137 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 MTG2Q9H4K7 406 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 ERVMER34-1Q9H9K5 563 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 INTS6Q9UL03 887 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 CNTN6Q9UQ52 1028 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 RAXQ9Y2V3 346 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 SLCO1B1Q9Y6L6 691 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 ITIH6Q6UXX5 1313 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 NUMA1Q14980 2115 aa11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 GOLGA4Q13439 2230 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-219ENST00000505207 BAHCC1Q9P281 2608 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 URB1O60287 2271 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 KCNU1A8MYU2 1149 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TLR4O00206 839 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 THAP12O43422 761 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 LETM1O95202 739 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TRUB2O95900 331 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 CCR1P32246 355 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 PLK1P53350 603 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 IL9RQ01113 521 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 OVGP1Q12889 678 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 ZC3H12AQ5D1E8 599 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 FSCBQ5H9T9 825 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 EFHC1Q5JVL4 640 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 C6orf118Q5T5N4 469 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 RAP1GAP2Q684P5 730 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TTI2Q6NXR4 508 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 DHRS13Q6UX07 377 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TMEM110Q86TL2 294 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TAC4Q86UU9 113 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 IQCHQ86VS3 1027 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TRIM59Q8IWR1 403 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 MFSD2AQ8NA29 543 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 ADAM32Q8TC27 787 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 NXPE2Q96DL1 559 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 NOX5Q96PH1 765 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM129BQ96TA1 746 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 ORAI3Q9BRQ5 295 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 INTS2Q9H0H0 1204 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 MAN1B1Q9UKM7 699 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
UBE2D3-219ENST00000505207 APC2O95996 2303 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 A0A1B0GVM2 712 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 C1QTNF3-AMACRE9PGA6 284 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 RFPL3O75679 317 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ZNF18P17022 549 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 MZF1P28698 734 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 RXRGP48443 463 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ADPRHP54922 357 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 MARSP56192 900 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ZNF177Q13360 481 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ILKQ13418 452 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 STAT4Q14765 748 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ACCSLQ4AC99 568 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 HS1BP3Q53T59 392 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 KCNT1Q5JUK3 1230 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 SYPL2Q5VXT5 272 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 NAPEPLDQ6IQ20 393 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 DENND1BQ6P3S1 775 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 MMS22LQ6ZRQ5 1243 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 APCDD1Q8J025 514 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ZNF606Q8WXB4 792 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 ERCC4Q92889 916 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 PTPRN2Q92932 1015 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 CCDC114Q96M63 670 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM204AQ9H8W3 233 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 SERGEFQ9UGK8 458 aa11.46□□□□□ -0.57
UBE2D3-219ENST00000505207 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-219ENST00000505207 SPEGQ15772 3267 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms