RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SERPINB11Q96P15 392 aa16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 SRRTQ9BXP5 876 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 TMEM245Q9H330 911 aa16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 STOML2Q9UJZ1 356 aa16.59■□□□□ 0.25
PDLIM7-213ENST00000505074 IRAK2O43187 625 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 SLC28A2O43868 658 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 GADD45BO75293 160 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 GABBR2O75899 941 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 FGFR1OPO95684 399 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 CKMT2P17540 419 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 CD70P32970 193 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 TRIM59Q8IWR1 403 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 CARNMT1Q8N4J0 409 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 DCBLD1Q8N8Z6 715 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 HJURPQ8NCD3 748 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 WFDC5Q8TCV5 224 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 RFFLQ8WZ73 363 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 ZNF578Q96N58 590 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 UBE2TQ9NPD8 197 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 AASDHPPTQ9NRN7 309 aa16.58■□□□□ 0.24
PDLIM7-213ENST00000505074 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 THAP12O43422 761 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 MED7O43513 233 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 IGLV3-27P01718 113 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 DLDP09622 509 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 CD38P28907 300 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 EPHA8P29322 1005 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 SLC6A4P31645 630 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 USP8P40818 1118 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 ST8SIA6P61647 398 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 CDH18Q13634 790 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 FAM133BQ5BKY9 247 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 ADIPOR2Q86V24 386 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 DQX1Q8TE96 717 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 GANCQ8TET4 914 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 KREMEN1Q96MU8 473 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 PRSS16Q9NQE7 514 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 NAALADL1Q9UQQ1 740 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 CEP83Q9Y592 693 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 SPTA1P02549 2419 aa16.57■□□□□ 0.24
PDLIM7-213ENST00000505074 APOEP02649 317 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 WNT1P04628 370 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 GNA15P30679 374 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 ACADSBP45954 432 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 INSM1Q01101 510 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 ZNF776Q68DI1 518 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 DENND1BQ6P3S1 775 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 KDM7AQ6ZMT4 941 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 USP30Q70CQ3 517 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 DHX40Q8IX18 779 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 OXR1Q8N573 874 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 TTC9Q92623 222 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 MED8Q96G25 268 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 CRACR2AQ9BSW2 395 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 TRIM62Q9BVG3 475 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 SUN2Q9UH99 717 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 SCML1Q9UN30 329 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
PDLIM7-213ENST00000505074 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 GPD2P43304 727 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 RPS24P62847 133 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 E2F1Q01094 437 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 VAC14Q08AM6 782 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 SFSWAPQ12872 951 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 BNIP3Q12983 259 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 ARHGAP44Q17R89 818 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 SLC45A4Q5BKX6 768 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 NADSYN1Q6IA69 706 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 TAC4Q86UU9 113 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 CHSY1Q86X52 802 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 LSMEM2Q8N112 164 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 CFAP52Q8N1V2 620 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 FCRL2Q96LA5 508 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
PDLIM7-213ENST00000505074 SYNJ2BP-COX16A0A087WUM0 186 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 LRRC72A6NJI9 287 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 E5RJQ4 531 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 KLK10O43240 276 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 MOCS3O95396 460 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 MT-CO3P00414 261 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 ACP1P24666 158 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 CSKP41240 450 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 RXRGP48443 463 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 CSRP3P50461 194 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 GALCP54803 685 aa16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-213ENST00000505074 CAMK4Q16566 473 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms