RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 EIF4A3P38919 411 aaKnown RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 ARL4AP40617 200 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 SLC1A1P43005 524 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 GSDMDP57764 484 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 RPS24P62847 133 aaKnown RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 RAD51Q06609 339 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF234Q14588 700 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 IFI16Q16666 785 aaKnown RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 GEN1Q17RS7 908 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 PITRM1Q5JRX3 1037 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 SYCP2LQ5T4T6 812 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 Q6ZS52 159 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 ZSCAN30Q86W11 494 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 FAM131BQ86XD5 332 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 MAML2Q8IZL2 1156 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 CCDC33Q8N5R6 958 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 EMC1Q8N766 993 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 OR2T3Q8NH03 318 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 TEKT4Q8WW24 435 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 FEM1AQ9BSK4 669 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 NHEJ1Q9H9Q4 299 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 TMEM248Q9NWD8 314 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 ARHGAP20Q9P2F6 1191 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 RCOR3Q9P2K3 495 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-220ENST00000505005 NCDNQ9UBB6 729 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 VPS28Q9UK41 221 aa10.13□□□□□ -0.79
NR1I3-220ENST00000505005 A0A087X0T9 212 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 GOLGA6L7A0A1B0GV03 622 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 TCRBV21S2A2A0A5A6 115 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 WASH4PA8MWX3 477 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 SGK1O00141 431 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 CCP110O43303 1012 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 NDUFS2O75306 463 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 ADH1BP00325 375 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 FAM228BP0C875 321 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 MAN1A1P33908 653 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 SERPINB6P35237 376 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 NUDT1P36639 197 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF75DP51815 510 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 HDAC4P56524 1084 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 LMAN2Q12907 356 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 TBX2Q13207 712 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-220ENST00000505005 CAMK2GQ13555 558 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-220ENST00000505005 GRM3Q14832 879 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 HNRNPA1L2Q32P51 320 aaKnown RBP10.12□□□□□ -0.79
NR1I3-220ENST00000505005 PARP15Q460N3 678 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 C2CD6Q53TS8 623 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 EGFLAMQ63HQ2 1017 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 RWDD4Q6NW29 188 aaKnown RBP10.12□□□□□ -0.79
NR1I3-220ENST00000505005 USP30Q70CQ3 517 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 LPCAT2Q7L5N7 544 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 ADIPOR2Q86V24 386 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 VSIG1Q86XK7 387 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 DCAF4L2Q8NA75 395 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 JOSD2Q8TAC2 188 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 SIPA1Q96FS4 1042 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 LRIG1Q96JA1 1093 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 CEP44Q9C0F1 390 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 TMEM245Q9H330 911 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 KDM4CQ9H3R0 1056 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 CTTNBP2NLQ9P2B4 639 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 MYO1AQ9UBC5 1043 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 SUSD2Q9UGT4 822 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 FZD10Q9ULW2 581 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 MUC6Q6W4X9 2439 aa10.12□□□□□ -0.79
NR1I3-220ENST00000505005 C1QTNF3-AMACRE9PGA6 284 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 H3BRJ5 948 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 RAMP2O60895 175 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF189O75820 626 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 NFKBIAP25963 317 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 EPHB2P29323 1055 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 CSKP41240 450 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 FNTBP49356 437 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 NDST2P52849 883 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 GALCP54803 685 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 TPI1P60174 286 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 RPL7AP62424 266 aaKnown RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ELAVL3Q14576 367 aaKnown RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 POLD3Q15054 466 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 PDK2Q15119 407 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 C15orf59Q2T9L4 293 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 INO80DQ53TQ3 878 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 WDR45BQ5MNZ6 344 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ZNF776Q68DI1 518 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 ANO7Q6IWH7 933 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 BZW1Q7L1Q6 419 aaKnown RBP10.11□□□□□ -0.79
NR1I3-220ENST00000505005 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 CFAP52Q8N1V2 620 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 BBS5Q8N3I7 341 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
NR1I3-220ENST00000505005 OLIG1Q8TAK6 271 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms