RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ANKRD20A1Q5TYW2 823 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 TTC39BQ5VTQ0 682 aaPredicted RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 ANKRD20A3Q5VUR7 823 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 PPP1R21Q6ZMI0 780 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 ZCCHC9Q8N567 271 aaKnown RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 KIAA1958Q8N8K9 716 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 NAT8LQ8N9F0 302 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 GLIS1Q8NBF1 620 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 MCUQ8NE86 351 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 MRPL38Q96DV4 380 aaKnown RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 LGMNQ99538 433 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 NEUROG2Q9H2A3 272 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 PABPC3Q9H361 631 aaKnown RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 ATXN3LQ9H3M9 355 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 TLE6Q9H808 572 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 C10orf88Q9H8K7 445 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 FAM53CQ9NYF3 392 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 XPO7Q9UIA9 1087 aaKnown RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 VANGL2Q9ULK5 521 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 NEU3Q9UQ49 428 aa10.41□□□□□ -0.74
DDX41-203ENST00000504781 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
DDX41-203ENST00000504781 XIRP2A4UGR9 3374 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 DOCK4Q8N1I0 1966 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 A0A0A0MRY4 1105 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CCDC195A0A1B0GUA6 201 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ARHGAP42A6NI28 874 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 MATN3O15232 486 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ALOX15BO15296 676 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CCL16O15467 120 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 MFSD11O43934 449 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 KLKB1P03952 638 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 COL9A1P20849 921 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 WEE1P30291 646 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CHKAP35790 457 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 VPS41P49754 854 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CDH4P55283 916 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 DUSP6Q16828 381 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ANO4Q32M45 955 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 TEX44Q53QW1 395 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ARHGAP15Q53QZ3 475 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 RAP1GAP2Q684P5 730 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 TXNDC8Q6A555 127 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 NADSYN1Q6IA69 706 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 PID1Q7Z2X4 250 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 TMC3Q7Z5M5 1100 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CROCCP2Q86T23 111 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 DENND1CQ8IV53 801 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ARHGAP12Q8IWW6 846 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CCDC13Q8IYE1 715 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 LGI2Q8N0V4 545 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
DDX41-203ENST00000504781 MAB21L3Q8N8X9 362 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CPT1BQ92523 772 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 IGSF8Q969P0 613 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 SPATA13Q96N96 652 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 RPRD1AQ96P16 312 aaPredicted RBP10.4□□□□□ -0.74
DDX41-203ENST00000504781 PPP1R2P1Q96PQ5 205 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 CORO1BQ9BR76 489 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 SLC46A2Q9BY10 475 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 SLC39A8Q9C0K1 460 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 MAGEH1Q9H213 219 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 TASP1Q9H6P5 420 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 MAN1C1Q9NR34 630 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 DNMT3BQ9UBC3 853 aaKnown RBP10.4□□□□□ -0.74
DDX41-203ENST00000504781 LSM7Q9UK45 103 aaKnown RBP10.4□□□□□ -0.74
DDX41-203ENST00000504781 AGO1Q9UL18 857 aaKnown RBP10.4□□□□□ -0.74
DDX41-203ENST00000504781 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 MFHAS1Q9Y4C4 1052 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 DENND4CQ5VZ89 1909 aa10.4□□□□□ -0.74
DDX41-203ENST00000504781 TRANK1O15050 2925 aa10.4□□□□□ -0.75
DDX41-203ENST00000504781 REV3LO60673 3130 aa10.4□□□□□ -0.75
DDX41-203ENST00000504781 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 GOLGA6L7A0A1B0GV03 622 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 E2F8A0AVK6 867 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 H3BQ06 376 aaPredicted RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 OPA1O60313 960 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 MAFKO60675 156 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 CLDN11O75508 207 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 RHOP08100 348 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 MYL4P12829 197 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 CCNB1P14635 433 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 TCF3P15923 654 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 EPCAMP16422 314 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 TSHRP16473 764 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 OR1E1P30953 314 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 CORO1AP31146 461 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 RENBPP51606 427 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 EIF3BP55884 814 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 ARL4CP56559 192 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 WASHC5Q12768 1159 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ZNF177Q13360 481 aaPredicted RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 KCNC3Q14003 757 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 HNRNPDQ14103 355 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 POLD3Q15054 466 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms