RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CA9Q16790 459 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 GEN1Q17RS7 908 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 FSCBQ5H9T9 825 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 TXNRD3NBQ6F5E7 133 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CXorf57Q6NSI4 855 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF662Q6ZS27 426 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 POLNQ7Z5Q5 900 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ANKS1BQ7Z6G8 1248 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 SETD3Q86TU7 594 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CIR1Q86X95 450 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CPNE8Q86YQ8 564 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 IER2Q9BTL4 223 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 CHRDQ9H2X0 955 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 RBM12Q9NTZ6 932 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ABCB8Q9NUT2 735 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 GPATCH2LQ9NWQ4 482 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 MPP6Q9NZW5 540 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF212Q9UDV6 495 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 ALG6Q9Y672 507 aa12.25□□□□□ -0.45
PDLIM5-208ENST00000504489 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 WASH4PA8MWX3 477 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 BUB1O43683 1085 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 CREB3O43889 395 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 DCNP07585 359 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 PABPC1P11940 636 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 COMTP21964 271 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 EPHB2P29323 1055 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 AVPR2P30518 371 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 CD70P32970 193 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 SSR1P43307 286 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 KIR2DL1P43626 348 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 LMAN2Q12907 356 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 EIF4HQ15056 248 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 E2F5Q15329 346 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 SMTNL2Q2TAL5 461 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 LRRC38Q5VT99 294 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 RWDD4Q6NW29 188 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 ZNF783Q6ZMS7 281 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 ADIPOR2Q86V24 386 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 NLRP14Q86W24 1093 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 AHI1Q8N157 1196 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 RNF10Q8N5U6 811 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 USP33Q8TEY7 942 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 HSPH1Q92598 858 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 TMEM248Q9NWD8 314 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 ELOVL2Q9NXB9 296 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 DONSONQ9NYP3 566 aa12.24□□□□□ -0.45
PDLIM5-208ENST00000504489 ILVBLA1L0T0 632 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 EEF2KO00418 725 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 FGF10O15520 208 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 KRT86O43790 486 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 RNF40O75150 1001 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 MOCS3O95396 460 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 RHOCP08134 193 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 HNRNPLP14866 589 aaKnown RBP eCLIP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 OR1E1P30953 314 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 MAPKAPK2P49137 400 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 ARSEP51690 589 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 NAP1L1P55209 391 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TPI1P60174 286 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 PPP6R3Q5H9R7 873 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TFAP2DQ7Z6R9 452 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 RTL3Q8N8U3 475 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 OR52K2Q8NGK3 314 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 UCMAQ8WVF2 138 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TSC1Q92574 1164 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TTC17Q96AE7 1141 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 ALG14Q96F25 216 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 FEM1AQ9BSK4 669 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 WDR70Q9NW82 654 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 CWC15Q9P013 229 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 RCOR3Q9P2K3 495 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 TRIM10Q9UDY6 481 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 HCN2Q9UL51 889 aa12.23□□□□□ -0.45
PDLIM5-208ENST00000504489 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms