RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 MS4A2Q01362 244 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 PPIDQ08752 370 aaKnown RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 MMRN1Q13201 1228 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 CRHR2Q13324 411 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TAPT1Q6NXT6 567 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 ZYG11AQ6WRX3 759 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 FAM47EQ6ZV65 393 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TMEM35BQ8NCS4 154 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PIP4K2CQ8TBX8 421 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 RNF217Q8TC41 542 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 USP33Q8TEY7 942 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PYROXD1Q8WU10 500 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 LZICQ8WZA0 190 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 FAM118BQ9BPY3 351 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 SH2D3AQ9BRG2 576 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TRIM56Q9BRZ2 755 aaKnown RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 HEMGNQ9BXL5 484 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 MTMR12Q9C0I1 747 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 NPIPB8E9PQR5 432 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 NPHS1O60500 1241 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 CST8O60676 142 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 SERPINE1P05121 402 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PGAM1P18669 254 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 GRK2P25098 689 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PEX2P28328 305 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 SLC26A2P50443 739 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 UBAP2LQ14157 1087 aaKnown RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 SPIDRQ14159 915 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 KIAA0040Q15053 153 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TRIP13Q15645 432 aaPredicted RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 CCDC153Q494R4 210 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 KCTD21Q4G0X4 260 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 C17orf99Q6UX52 265 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 ZNF467Q7Z7K2 595 aaPredicted RBP6.54□□□□□ -1.36
COPB2-204ENST00000504295 USP37Q86T82 979 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 CPA6Q8N4T0 437 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PACRGLQ8N7B6 248 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 ACVR1CQ8NER5 493 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TFAP2CQ92754 450 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 TMEM176AQ96HP8 235 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 CLPTM1LQ96KA5 538 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 FAM111AQ96PZ2 611 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 PTPN18Q99952 460 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 GDF15Q99988 308 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 SMYD3Q9H7B4 428 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 RPS6KL1Q9Y6S9 549 aa6.54□□□□□ -1.36
COPB2-204ENST00000504295 HTTP42858 3142 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 A0A0J9YVX5 310 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 H3BNH8 94 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 CHMP2AO43633 222 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
COPB2-204ENST00000504295 MYL3P08590 195 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 SLC35E2BP0CK96 405 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 KCNE1P15382 129 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 MYF6P23409 242 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 GSTT1P30711 240 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 LBX1P52954 281 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 ARHGAP1Q07960 439 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 LAMTOR4Q0VGL1 99 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 C5orf22Q49AR2 442 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 EFHC1Q5JVL4 640 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 TMEM270Q6UE05 265 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 PGAM4Q8N0Y7 254 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 CNTD1Q8N815 330 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 CSPG4P5Q96PW8 444 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 ZIC5Q96T25 663 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 SNRNP25Q9BV90 132 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 WWP1Q9H0M0 922 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 MROH8Q9H579 483 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 XAB2Q9HCS7 855 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 A0A0A0MRY4 1105 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 DAB1O75553 588 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 RPSAP08865 295 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 COL6A2P12110 1019 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 ACADVLP49748 655 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 CHN2P52757 468 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 CSE1LP55060 971 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 UBXN2AP68543 259 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 ADARB1P78563 741 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 IKQ13123 557 aaPredicted RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 CELF3Q5SZQ8 465 aaKnown RBP6.53□□□□□ -1.36
COPB2-204ENST00000504295 METTL7BQ6UX53 244 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 RHPN2Q8IUC4 686 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 LRRC52Q8N7C0 313 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 PJA1Q8NG27 643 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 SPATA18Q8TC71 538 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 E2F7Q96AV8 911 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 HDAC11Q96DB2 347 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 SPATA13Q96N96 652 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
COPB2-204ENST00000504295 RMDN3Q96TC7 470 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms