RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 OR52N4Q8NGI2 321 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 ITFG2Q969R8 447 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 GPR78Q96P69 363 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 DCLK3Q9C098 648 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 UNKQ9C0B0 810 aaKnown RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 BTBD1Q9H0C5 482 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SPAG4Q9NPE6 437 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 TCF7L2Q9NQB0 619 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SLC52A1Q9NWF4 448 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 SWAP70Q9UH65 585 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 RPS6KL1Q9Y6S9 549 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 RAD54L2Q9Y4B4 1467 aa2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 CFAP65Q6ZU64 1925 aaKnown RBP2.3□□□□□ -2.04
HMGB3P17-201ENST00000504195 GOLGA6CA6NDK9 693 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 GOLGA6BA6NDN3 693 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 FOXO6A8MYZ6 492 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 TPP1O14773 563 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 SPRY3O43610 288 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 KIF1CO43896 1103 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 LETM1O95202 739 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 SCGB1D2O95969 90 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 IGLV2-11P01706 119 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PRSS2P07478 247 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 HSP90AB1P08238 724 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 RFPL3SP0C7P2 107 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 GOLGA6DP0CG33 693 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 VDRP11473 427 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 ALADP13716 330 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 IDEP14735 1019 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 HOXD3P31249 432 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 CD151P48509 253 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PCYT1AP49585 367 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 RASSF2P50749 326 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 SEC61A1P61619 476 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 IGBP1P78318 339 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 POU5F1Q01860 360 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 GPR18Q14330 331 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 NFE2Q16621 373 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 HSP90AB2PQ58FF8 381 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 C9orf57Q5W0N0 161 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 CYB5RLQ6IPT4 315 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 KLHL10Q6JEL2 608 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 CRTC1Q6UUV9 634 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 CHST15Q7LFX5 561 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 C16orf82Q7Z2V1 217 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRT27Q7Z3Y8 459 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 CTU1Q7Z7A3 348 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 TCEAL8Q8IYN2 117 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAGEB6Q8N7X4 407 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PRR26Q8N8Z3 221 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 GRAMD1AQ96CP6 724 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 LRRC46Q96FV0 321 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF830Q96NB3 372 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAGEB5Q9BZ81 275 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 EGLN1Q9GZT9 426 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 NUP62CLQ9H1M0 184 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAP6D1Q9H9H5 199 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PLAC1Q9HBJ0 212 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 AS3MTQ9HBK9 375 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PNPLA8Q9NP80 782 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 FBXO28Q9NVF7 368 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 GOLGA6AQ9NYA3 693 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 TBC1D14Q9P2M4 693 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 DDX20Q9UHI6 824 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 FZD10Q9ULW2 581 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 G3BP2Q9UN86 482 aaKnown RBP2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 B3GNT3Q9Y2A9 372 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PCDHB7Q9Y5E2 793 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 SNX13Q9Y5W8 968 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 PTGDR2Q9Y5Y4 395 aa2.29□□□□□ -2.04
HMGB3P17-201ENST00000504195 RPGRIP1LQ68CZ1 1315 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 CLCA1A8K7I4 914 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 F8W8V4 182 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 AREL1O15033 823 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 EPB41L2O43491 1005 aaKnown RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ZNF500O60304 480 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PPP6R2O75170 966 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 CNTN5O94779 1100 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PPP1R3DO95685 299 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 GLUD1P00367 558 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 KRT5P13647 590 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ARSBP15848 533 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 TGM2P21980 687 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 MST1P26927 711 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 MAN1A1P33908 653 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 GLUD2P49448 558 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 Q0VFX4 171 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PMPCAQ10713 525 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 KIF5AQ12840 1032 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 FOXD4Q12950 439 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ATP1A4Q13733 1029 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 DAG1Q14118 895 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 GALEQ14376 348 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PPP2R5AQ15172 486 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 PLEKHG6Q3KR16 790 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 DNTTIP2Q5QJE6 756 aaKnown RBP2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ODR4Q5SWX8 454 aa2.28□□□□□ -2.04
HMGB3P17-201ENST00000504195 ASPHD1Q5U4P2 390 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms