RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 GDAP2Q9NXN4 497 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 KCNK4Q9NYG8 393 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 ANKMY1Q9P2S6 941 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 ITGA11Q9UKX5 1188 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 ODF2LQ9ULJ1 636 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 CLCA2Q9UQC9 943 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 PCDHGB2Q9Y5G2 931 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 KCNMB2Q9Y691 235 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.81□□□□□ -1.8
USP46-205ENST00000504078 MYO18AQ92614 2054 aaKnown RBP3.81□□□□□ -1.8
USP46-205ENST00000504078 PTPRQQ9UMZ3 2332 aa3.81□□□□□ -1.8
USP46-205ENST00000504078 COL27A1Q8IZC6 1860 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 A0A1W2PNU3 283 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 A8MXQ7 604 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MID1O15344 667 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 PCDHGA12O60330 932 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 USP12O75317 370 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CSO75390 466 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 STC2O76061 302 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 KIF20AO95235 890 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MT-CO3P00414 261 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 TNNC2P02585 160 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 KLKB1P03952 638 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 F13BP05160 661 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 IDEP14735 1019 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 PTPN1P18031 435 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 MAP4P27816 1152 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 GJB2P29033 226 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MAT2AP31153 395 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 PREPP48147 710 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CASP4P49662 377 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CSRP3P50461 194 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CYP2J2P51589 502 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 NEK4P51957 841 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ZNF131P52739 623 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 METAP1P53582 386 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 BCAT1P54687 386 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MYL6P60660 151 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 RPS14P62263 151 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 DAB2P98082 770 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ATP11AP98196 1134 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 GTF2BQ00403 316 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 RHDQ02161 417 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 EFEMP1Q12805 493 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ORC2Q13416 577 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 RTP5Q14D33 572 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 TCEA2Q15560 299 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 HYIQ5T013 277 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 FYB2Q5VWT5 728 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 KIAA0895LQ68EN5 471 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ACOT1Q86TX2 421 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 VASH2Q86V25 355 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 PTRH1Q86Y79 214 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 ANKMY2Q8IV38 441 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 DHX40Q8IX18 779 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 ZC3H3Q8IXZ2 948 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 EXD3Q8N9H8 876 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 PDZD8Q8NEN9 1154 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CADM4Q8NFZ8 388 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 OR2T3Q8NH03 318 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 SLC2A14Q8TDB8 520 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 SAP25Q8TEE9 199 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 FOXD4L4Q8WXT5 416 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 LARP4BQ92615 738 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 EXTL1Q92935 676 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ARRDC3Q96B67 414 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 CCDC127Q96BQ5 260 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MED8Q96G25 268 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 C8orf48Q96LL4 319 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ELF4Q99607 663 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 KIF2CQ99661 725 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 SMOQ99835 787 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 NUP58Q9BVL2 599 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 NRSN2Q9GZP1 204 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 BTBD1Q9H0C5 482 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 MRPL44Q9H9J2 332 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 DMAP1Q9NPF5 467 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 FZD3Q9NPG1 666 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ITM2CQ9NQX7 267 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ABCB8Q9NUT2 735 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 INTS13Q9NVM9 706 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 UCKL1Q9NWZ5 548 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 THAP10Q9P2Z0 257 aaPredicted RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 SRPK3Q9UPE1 567 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 SATB2Q9UPW6 733 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 R3HCC1Q9Y3T6 440 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 GOLGA4Q13439 2230 aaKnown RBP3.8□□□□□ -1.8
USP46-205ENST00000504078 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
USP46-205ENST00000504078 ATP8B3O60423 1300 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 A0A1B0GVM2 712 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 SLC12A8A0AV02 714 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 BLACEA4D250 179 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 E9PAM4 449 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 H3BRJ5 948 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 GFRA2O00451 464 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 TRIM38O00635 465 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 CLIC2O15247 247 aa3.79□□□□□ -1.8
USP46-205ENST00000504078 MSI1O43347 362 aaKnown RBP3.79□□□□□ -1.8
USP46-205ENST00000504078 SIGLEC6O43699 453 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms