RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 RAB44Q7Z6P3 723 aaPredicted RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 CCAR2Q8N163 923 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 MSANTD4Q8NCY6 345 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 MYO19Q96H55 970 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 MRGPRX3Q96LB0 322 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 OMDQ99983 421 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 SIK2Q9H0K1 926 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 VPS16Q9H269 839 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 MTG2Q9H4K7 406 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 AJAP1Q9UKB5 411 aaPredicted RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 DSPP15924 2871 aaKnown RBP12.33□□□□□ -0.44
MED28-203ENST00000503945 PKD1L2Q7Z442 2459 aa12.33□□□□□ -0.44
MED28-203ENST00000503945 A0A1B0GVM2 712 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 TCAF2A6NFQ2 919 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 FAM47DPA6NHR8 397 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 TTC34A8MYJ7 566 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 PAGE1O75459 146 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 FSBPO95073 299 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 ZNF18P17022 549 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 SLC8A1P32418 973 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 CTSOP43234 321 aaPredicted RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 GABRB2P47870 512 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 CSNK1EP49674 416 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 SUZ12Q15022 739 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 HLA-BQ31612 363 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 PTPN20Q4JDL3 420 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 LRRC31Q6UY01 552 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 MMAAQ8IVH4 418 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 C1orf216Q8TAB5 229 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 C1orf74Q96LT6 269 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 GAREM1Q9H706 876 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 VANGL2Q9ULK5 521 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.32□□□□□ -0.44
MED28-203ENST00000503945 FHOD1Q9Y613 1164 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
MED28-203ENST00000503945 LRRC72A6NJI9 287 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 CLDN11O75508 207 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 DAB1O75553 588 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 RNASEH2AO75792 299 aaKnown RBP12.31□□□□□ -0.44
MED28-203ENST00000503945 LSM8O95777 96 aaKnown RBP12.31□□□□□ -0.44
MED28-203ENST00000503945 CER1O95813 267 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 IL1BP01584 269 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 CD27P26842 260 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 MZF1P28698 734 aaPredicted RBP12.31□□□□□ -0.44
MED28-203ENST00000503945 CDH5P33151 784 aaPredicted RBP12.31□□□□□ -0.44
MED28-203ENST00000503945 CXCR3P49682 368 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 GRIK2Q13002 908 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 CST6Q15828 149 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 SLC25A52Q3SY17 297 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 BRMS1LQ5PSV4 323 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 PNPLA1Q8N8W4 532 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
MED28-203ENST00000503945 CPA5Q8WXQ8 436 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 IGSF8Q969P0 613 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 SKA1Q96BD8 255 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 BIRC7Q96CA5 298 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 NPY6RQ99463 290 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 TAB2Q9NYJ8 693 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 NBEAQ8NFP9 2946 aa12.31□□□□□ -0.44
MED28-203ENST00000503945 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 MID1O15344 667 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 GOT1P17174 413 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 C5AR1P21730 350 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 SCNN1AP37088 669 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 SULT1E1P49888 294 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 GALCP54803 685 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 CDH4P55283 916 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 KRT83P78385 493 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms