RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 MAGEB5Q9BZ81 275 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 ERVW-1Q9UQF0 538 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 MYO15AQ9UKN7 3530 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 DMDP11532 3685 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 PRR23AA6NEV1 266 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 ZBTB24O43167 697 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 SYNCRIPO60506 623 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 LRCH4O75427 683 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 RPP40O75818 363 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 EPHX1P07099 455 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 RHOCP08134 193 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 H2AFZP0C0S5 128 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 RHOQP17081 205 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 OR1E1P30953 314 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 PCK1P35558 622 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 CTSOP43234 321 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 VASPP50552 380 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 ST8SIA6P61647 398 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 SEMA3BQ13214 749 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 RNF219Q5W0B1 726 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 ZNF783Q6ZMS7 281 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 H2AFVQ71UI9 128 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 ASCL5Q7RTU5 278 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 TFAP2DQ7Z6R9 452 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 NLRP14Q86W24 1093 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 NIPA2Q8N8Q9 360 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 CTNNBL1Q8WYA6 563 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 TBC1D31Q96DN5 1066 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 PACSIN1Q9BY11 444 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 TPSD1Q9BZJ3 242 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 BCCIPQ9P287 314 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 UVRAGQ9P2Y5 699 aa18.73■□□□□ 0.59
PDLIM7-209ENST00000503346 ILVBLA1L0T0 632 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 TMEM253P0C7T8 217 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 C7P10643 843 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 HLA-EP13747 358 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 NDUFV2P19404 249 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 MIPP30301 263 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 CAMK2GQ13555 558 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 SIM2Q14190 667 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 PIGHQ14442 188 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 USP39Q53GS9 565 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 RWDD4Q6NW29 188 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 PSTKQ8IV42 348 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 PYROXD2Q8N2H3 581 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 MRGPRX1Q96LB2 322 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 PEBP4Q96S96 227 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 TMEM248Q9NWD8 314 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 SUN2Q9UH99 717 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 IP6K2Q9UHH9 426 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 ANAPC7Q9UJX3 599 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 VPS28Q9UK41 221 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 SMG5Q9UPR3 1016 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 FANCMQ8IYD8 2048 aa18.72■□□□□ 0.59
PDLIM7-209ENST00000503346 PRPSAP2O60256 369 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 HTR7P34969 479 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 P2RY2P41231 377 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 MAPKAPK2P49137 400 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 MRE11P49959 708 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 ERMARDQ5T6L9 678 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 CYP4V2Q6ZWL3 525 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 CEP68Q76N32 757 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 PGBD3Q8N328 593 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 OR2T3Q8NH03 318 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 ZNF564Q8TBZ8 553 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 ERLEC1Q96DZ1 483 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 PANX2Q96RD6 677 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 PSMB7Q99436 277 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 EPAS1Q99814 870 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 MUC3BQ9H195 1237 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 FBRSQ9HAH7 460 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 PCSK1NQ9UHG2 260 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 USP18Q9UMW8 372 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 AP4E1Q9UPM8 1137 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 VPS13AQ96RL7 3174 aa18.71■□□□□ 0.59
PDLIM7-209ENST00000503346 MUC22E2RYF6 1773 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 A0A0D9SEW6 157 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 MYO1FO00160 1098 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 GFRA3O60609 400 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 FECHP22830 423 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 CDC25BP30305 580 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 COPAP53621 1224 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 BYSLQ13895 437 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 HNRNPA1L2Q32P51 320 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 MAP7D1Q3KQU3 841 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 METTL3Q86U44 580 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 C11orf74Q86VG3 221 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 ZNF366Q8N895 744 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 DCAF4L2Q8NA75 395 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 ZC3H10Q96K80 434 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 BTBD6Q96KE9 485 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 RPL10LQ96L21 214 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 SNRNP25Q9BV90 132 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 C2orf49Q9BVC5 232 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 MKRN2Q9H000 416 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
PDLIM7-209ENST00000503346 GPATCH2LQ9NWQ4 482 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms