RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 OR6B1O95007 311 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 PGM3O95394 542 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 PDK1Q15118 436 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 CLEC14AQ86T13 490 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 FBXO16Q8IX29 292 aaPredicted RBP25.03■■□□□ 1.6
DDX41-202ENST00000503078 OR6B3Q8NGW1 331 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 EZH1Q92800 747 aaPredicted RBP25.03■■□□□ 1.6
DDX41-202ENST00000503078 ZNF669Q96BR6 464 aaPredicted RBP25.03■■□□□ 1.6
DDX41-202ENST00000503078 CNDP1Q96KN2 507 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 UBE2OQ9C0C9 1292 aaKnown RBP25.03■■□□□ 1.6
DDX41-202ENST00000503078 R3HDMLQ9H3Y0 253 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 ERAP1Q9NZ08 941 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 PACSIN3Q9UKS6 424 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 RGSL1A5PLK6 1076 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 PPEF2O14830 753 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 INSRRP14616 1297 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 ZNF484Q5JVG2 852 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.03■■□□□ 1.6
DDX41-202ENST00000503078 AGR3Q8TD06 166 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 DGCR14Q96DF8 476 aaKnown RBP25.03■■□□□ 1.6
DDX41-202ENST00000503078 PGLYRP2Q96PD5 576 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 DPEP3Q9H4B8 488 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 CLIC5Q9NZA1 410 aa25.03■■□□□ 1.6
DDX41-202ENST00000503078 DNAJA2O60884 412 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 PMLP29590 882 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 IRF9Q00978 393 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 MAP7Q14244 749 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 R3HDM1Q15032 1099 aaKnown RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 UNC93AQ86WB7 457 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 SNX32Q86XE0 403 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 ANKRD52Q8NB46 1076 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 KYQ8NBH2 561 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 OR52K1Q8NGK4 314 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 B4GALNT2Q8NHY0 566 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 PRICKLE1Q96MT3 831 aaPredicted RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 ILKAPQ9H0C8 392 aaPredicted RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 GOLGA8QA0A0J9YX86 632 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 GOLGA8OA6NCC3 632 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 GOLGA8NF8WBI6 632 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 VTNP04004 478 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 CD1EP15812 388 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 ADORA2BP29275 332 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 RPL5P46777 297 aaKnown RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 BCAT1P54687 386 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 CNGA3Q16281 694 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 RARS2Q5T160 578 aaKnown RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 TMEM126BQ8IUX1 230 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 DRAXINQ8NBI3 349 aaPredicted RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 LRGUKQ96M69 825 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 GATA5Q9BWX5 397 aaPredicted RBP25.02■■□□□ 1.6
DDX41-202ENST00000503078 PRDM12Q9H4Q4 367 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 NMRAL1Q9HBL8 299 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 RAB26Q9ULW5 256 aa25.02■■□□□ 1.6
DDX41-202ENST00000503078 SCN4AP35499 1836 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 PDLIM1O00151 329 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 TSPAN1O60635 241 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 RGS2P41220 211 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 RPL34P49207 117 aaKnown RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 GTF2A2P52657 109 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 OLIG2Q13516 323 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 DSELQ8IZU8 1212 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 LINC01465Q8N7H1 131 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 RP9Q8TA86 221 aaKnown RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 RNF139Q8WU17 664 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 NMD3Q96D46 503 aaKnown RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 AGAP2Q99490 1192 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 CAB39LQ9H9S4 337 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 MATN2O00339 956 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 TXNP10599 105 aaKnown RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 MATKP42679 507 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 DLG2Q15700 870 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 ARMC3Q5W041 872 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 ZFP1Q6P2D0 407 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 BNC2Q6ZN30 1099 aaPredicted RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 PID1Q7Z2X4 250 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 PSTKQ8IV42 348 aaKnown RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 URGCPQ8TCY9 931 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 WDR55Q9H6Y2 383 aaPredicted RBP25.01■■□□□ 1.59
DDX41-202ENST00000503078 UBAP1Q9NZ09 502 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 VPS28Q9UK41 221 aa25.01■■□□□ 1.59
DDX41-202ENST00000503078 PLXNA1Q9UIW2 1896 aa25■■□□□ 1.59
DDX41-202ENST00000503078 LTFP02788 710 aa25■■□□□ 1.59
DDX41-202ENST00000503078 C2P06681 752 aa25■■□□□ 1.59
DDX41-202ENST00000503078 SPATA31D3P0C874 917 aa25■■□□□ 1.59
DDX41-202ENST00000503078 GRM5P41594 1212 aa25■■□□□ 1.59
DDX41-202ENST00000503078 SULT1E1P49888 294 aa25■■□□□ 1.59
DDX41-202ENST00000503078 ADGRE1Q14246 886 aa25■■□□□ 1.59
DDX41-202ENST00000503078 FLOT2Q14254 428 aa25■■□□□ 1.59
DDX41-202ENST00000503078 LARP7Q4G0J3 582 aaKnown RBP eCLIP25■■□□□ 1.59
DDX41-202ENST00000503078 PPM1LQ5SGD2 360 aa25■■□□□ 1.59
DDX41-202ENST00000503078 SPATA31D4Q6ZUB0 917 aa25■■□□□ 1.59
DDX41-202ENST00000503078 TMEM135Q86UB9 458 aa25■■□□□ 1.59
DDX41-202ENST00000503078 TRPM4Q8TD43 1214 aa25■■□□□ 1.59
DDX41-202ENST00000503078 AGAP3Q96P47 875 aa25■■□□□ 1.59
DDX41-202ENST00000503078 CDRT15Q96T59 188 aa25■■□□□ 1.59
DDX41-202ENST00000503078 CXCL16Q9H2A7 254 aa25■■□□□ 1.59
DDX41-202ENST00000503078 OXSMQ9NWU1 459 aa25■■□□□ 1.59
DDX41-202ENST00000503078 HCRTO43612 131 aa25■■□□□ 1.59
DDX41-202ENST00000503078 CLPTM1O96005 669 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms