RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
NR1I3-216ENST00000502848 SFXN1Q9H9B4 322 aa9.31□□□□□ -0.92
NR1I3-216ENST00000502848 KIF9Q9HAQ2 790 aa9.31□□□□□ -0.92
NR1I3-216ENST00000502848 XAB2Q9HCS7 855 aaKnown RBP9.31□□□□□ -0.92
NR1I3-216ENST00000502848 GOLGA6AQ9NYA3 693 aa9.31□□□□□ -0.92
NR1I3-216ENST00000502848 NUDT5Q9UKK9 219 aa9.31□□□□□ -0.92
NR1I3-216ENST00000502848 YBX2Q9Y2T7 364 aaKnown RBP9.31□□□□□ -0.92
NR1I3-216ENST00000502848 ILVBLA1L0T0 632 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 RNF103O00237 685 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 MATN3O15232 486 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 CACNG3O60359 315 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 GREM1O60565 184 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 MAFKO60675 156 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 SPAG6O75602 509 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 MBL2P11226 248 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 IRS1P35568 1242 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 PMS2P54278 862 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 ARL4CP56559 192 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 MRPS25P82663 173 aaKnown RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 DHX9Q08211 1270 aaKnown RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 KCNC3Q14003 757 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 HNRNPDQ14103 355 aaKnown RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 RFTN1Q14699 578 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 TRADDQ15628 312 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 SLC14A2Q15849 920 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 HIF1AQ16665 826 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 FAM153CQ494X1 144 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 ANKRD20A2Q5SQ80 823 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 ANKRD20A1Q5TYW2 823 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 ANKRD20A3Q5VUR7 823 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 NADSYN1Q6IA69 706 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 CENPUQ71F23 418 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 TDHQ8IZJ6 230 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 PDIK1LQ8N165 341 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 GLIS1Q8NBF1 620 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 HJURPQ8NCD3 748 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 CCNYQ8ND76 341 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 PRCCQ92733 491 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 IL12RB2Q99665 862 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 TMEM109Q9BVC6 243 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 MAGEB5Q9BZ81 275 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 GBA3Q9H227 469 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 TASP1Q9H6P5 420 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 FAM53CQ9NYF3 392 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 FAM153AQ9UHL3 310 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 XPO7Q9UIA9 1087 aaKnown RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 AGO1Q9UL18 857 aaKnown RBP9.3□□□□□ -0.92
NR1I3-216ENST00000502848 VANGL2Q9ULK5 521 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 HPCAL4Q9UM19 191 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 TBC1D30Q9Y2I9 924 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 HCFC2Q9Y5Z7 792 aa9.3□□□□□ -0.92
NR1I3-216ENST00000502848 GRXCR1A8MXD5 290 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 ALOX15BO15296 676 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RAMP2O60895 175 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 TCEA3O75764 348 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 ANXA9O76027 345 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 SUN1O94901 812 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 KLKB1P03952 638 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 CKMP06732 381 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RHOP08100 348 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 GSTA2P09210 222 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 MYOGP15173 224 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 VAV1P15498 845 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 AVPR1AP37288 418 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 MAGEA3P43357 314 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RENBPP51606 427 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 KCNQ1P51787 676 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 BASP1P80723 227 aaKnown RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 IL10RBQ08334 325 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 AP1B1Q10567 949 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 WASHC5Q12768 1159 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 USP4Q13107 963 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 SERINC3Q13530 473 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 SLC12A1Q13621 1099 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 TRIP13Q15645 432 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 TEX44Q53QW1 395 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 PRSS36Q5K4E3 855 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RAP1GAP2Q684P5 730 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 C14orf80Q86SX3 495 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 CCNJLQ8IV13 435 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 GSPT2Q8IYD1 628 aaKnown RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 LGI2Q8N0V4 545 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 SHKBP1Q8TBC3 707 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 ZSCAN18Q8TBC5 510 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 NSMCE1Q8WV22 266 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 ZNF707Q96C28 371 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 TEKT5Q96M29 485 aa9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RBM15Q96T37 977 aaKnown RBP eCLIP9.29□□□□□ -0.92
NR1I3-216ENST00000502848 RUFY1Q96T51 708 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms