RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 MOCS3O95396 460 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 ATP5BP06576 529 aaKnown RBP25.81■■□□□ 1.72
LSM6-202ENST00000502781 POLR2EP19388 210 aaKnown RBP25.81■■□□□ 1.72
LSM6-202ENST00000502781 ZNF234Q14588 700 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 CRY1Q16526 586 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 DPYSL2Q16555 572 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 ZNF528Q3MIS6 628 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 C6orf118Q5T5N4 469 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 RWDD4Q6NW29 188 aaKnown RBP25.81■■□□□ 1.72
LSM6-202ENST00000502781 CHPFQ8IZ52 775 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 PPP1R9BQ96SB3 815 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 KCTD15Q96SI1 283 aaPredicted RBP25.81■■□□□ 1.72
LSM6-202ENST00000502781 CD248Q9HCU0 757 aa25.81■■□□□ 1.72
LSM6-202ENST00000502781 ILVBLA1L0T0 632 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 WASH4PA8MWX3 477 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 PJA2O43164 708 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 CREB3O43889 395 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 ASLP04424 464 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 RHOCP08134 193 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 RARAP10276 462 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 EPHB2P29323 1055 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 OR1E1P30953 314 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 MAPKAPK2P49137 400 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 VAV2P52735 878 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 ZNF135P52742 658 aaPredicted RBP25.8■■□□□ 1.72
LSM6-202ENST00000502781 MESDQ14696 234 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 KCNT1Q5JUK3 1230 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 TMEM92Q6UXU6 159 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 ZNF783Q6ZMS7 281 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 LRRC8AQ8IWT6 810 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 CCDC112Q8NEF3 446 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 MYO19Q96H55 970 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 NDFIP2Q9NV92 336 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 CACNA2D2Q9NY47 1150 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 HCN4Q9Y3Q4 1203 aa25.8■■□□□ 1.72
LSM6-202ENST00000502781 BTNL10A8MVZ5 291 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 IL12RB1P42701 662 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 HCAR3P49019 387 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 KRT83P78385 493 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 CSTF1Q05048 431 aaKnown RBP25.79■■□□□ 1.72
LSM6-202ENST00000502781 HADHQ16836 314 aaKnown RBP25.79■■□□□ 1.72
LSM6-202ENST00000502781 SMTNL2Q2TAL5 461 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 RNF219Q5W0B1 726 aaPredicted RBP25.79■■□□□ 1.72
LSM6-202ENST00000502781 CAMKK1Q8N5S9 505 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 RTL3Q8N8U3 475 aaKnown RBP25.79■■□□□ 1.72
LSM6-202ENST00000502781 KDM1BQ8NB78 822 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 CYB5D2Q8WUJ1 264 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 MRGPRX3Q96LB0 322 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 TMEM245Q9H330 911 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 SALL4Q9UJQ4 1053 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 SLC8A2Q9UPR5 921 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 STON1Q9Y6Q2 735 aa25.79■■□□□ 1.72
LSM6-202ENST00000502781 A0A0D9SEW6 157 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 A0A1W2PQF6 199 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 WASH3PC4AMC7 463 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 FGF10O15520 208 aaPredicted RBP25.78■■□□□ 1.72
LSM6-202ENST00000502781 SP9P0CG40 484 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 DGKEP52429 567 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 TAS2R40P59535 323 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 SULT2A1Q06520 285 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 TSSK4Q6SA08 328 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 FAM71BQ8TC56 605 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 LACRTQ9GZZ8 138 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 ZWILCHQ9H900 591 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 PLA2G4CQ9UP65 541 aa25.78■■□□□ 1.72
LSM6-202ENST00000502781 EEF2KO00418 725 aaKnown RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 ARHGAP6O43182 974 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 WASP42768 502 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 CTSOP43234 321 aaPredicted RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 VASPP50552 380 aaPredicted RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 TPI1P60174 286 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 SDE2Q6IQ49 451 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 PSMB7Q99436 277 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 FAM126AQ9BYI3 521 aaPredicted RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 CATSPERBQ9H7T0 1116 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.77■■□□□ 1.72
LSM6-202ENST00000502781 CWC15Q9P013 229 aaKnown RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 VPS28Q9UK41 221 aa25.77■■□□□ 1.72
LSM6-202ENST00000502781 ARIH1Q9Y4X5 557 aaPredicted RBP25.77■■□□□ 1.72
LSM6-202ENST00000502781 MUC22E2RYF6 1773 aaPredicted RBP25.76■■□□□ 1.71
LSM6-202ENST00000502781 H0Y858 1186 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 HOXB2P14652 356 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 SLC1A1P43005 524 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 ARSEP51690 589 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 ECT2LQ008S8 904 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 GNA12Q03113 381 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 PPP6R3Q5H9R7 873 aaPredicted RBP25.76■■□□□ 1.71
LSM6-202ENST00000502781 RFX8Q6ZV50 586 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 POLNQ7Z5Q5 900 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 DCAF4L2Q8NA75 395 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 HSPH1Q92598 858 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 DESI2Q9BSY9 194 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 MUC3BQ9H195 1237 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 NOL6Q9H6R4 1146 aaKnown RBP25.76■■□□□ 1.71
LSM6-202ENST00000502781 ERVW-1Q9UQF0 538 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 DUSP10Q9Y6W6 482 aa25.76■■□□□ 1.71
LSM6-202ENST00000502781 CCDC163A0A0D9SF12 145 aa25.75■■□□□ 1.71
LSM6-202ENST00000502781 TMEM110-MUSTN1A8MSY1 372 aa25.75■■□□□ 1.71
LSM6-202ENST00000502781 BUB1BO60566 1050 aaPredicted RBP25.75■■□□□ 1.71
LSM6-202ENST00000502781 SRPRAP08240 638 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms