RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CCNDBP1O95273 360 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 C22orf31O95567 290 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 LMNAP02545 664 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TPOP07202 933 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 GRPP07492 148 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 JUNBP17275 347 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TPH1P17752 444 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 LAG3P18627 525 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 FBLN1P23142 703 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 CPT2P23786 658 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 DEKP35659 375 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ETV4P43268 484 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 CPT1AP50416 773 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TKTL1P51854 596 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 CDR1P51861 262 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 WNT3AP56704 352 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 MRPS5P82675 430 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 DUSP2Q05923 314 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 MRPL28Q13084 256 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ARHGEF7Q14155 803 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 NPY5RQ15761 445 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SHROOM1Q2M3G4 852 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SMU1Q2TAY7 513 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZNF628Q5EBL2 1059 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 UBAP2Q5T6F2 1119 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 LIPMQ5VYY2 423 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 KLHL35Q6PF15 583 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 PET117Q6UWS5 81 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 PPP1R42Q7Z4L9 355 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ADGRG6Q86SQ4 1221 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 LURAP1LQ8IV03 231 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TUSC5Q8IXB3 177 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM71DQ8N9W8 422 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 IL17RDQ8NFM7 739 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 BICD2Q8TD16 824 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZFAND2BQ8WV99 257 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 HMGB4Q8WW32 186 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ATP6V0A1Q93050 837 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 GRAMD1AQ96CP6 724 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TRIM44Q96DX7 344 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 MCRS1Q96EZ8 462 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 LENG8Q96PV6 779 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 NR1H4Q96RI1 486 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 AGAP2Q99490 1192 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 PIP5K1AQ99755 562 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 HERC2P3Q9BVR0 1158 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 HAPLN2Q9GZV7 340 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TAOK3Q9H2K8 898 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 STN1Q9H668 368 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 BARX1Q9HBU1 254 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 MID1IP1Q9NPA3 183 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 NRIP3Q9NQ35 241 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SPATA6Q9NWH7 488 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SUCLA2Q9P2R7 463 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 DKK4Q9UBT3 224 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 MBD1Q9UIS9 605 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 CPSF3Q9UKF6 684 aaKnown RBP4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SARDHQ9UL12 918 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 SMC3Q9UQE7 1217 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 ATP11BQ9Y2G3 1177 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 PCDHA5Q9Y5H7 936 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 TRPV2Q9Y5S1 764 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 IRAK3Q9Y616 596 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 WNK3Q9BYP7 1800 aa4.55□□□□□ -1.68
HMGB1P21-201ENST00000502313 PLEKHG2Q9H7P9 1386 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 NPC1L1Q9UHC9 1359 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 KIF7Q2M1P5 1343 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM237BA0A1B0GVD1 139 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 hCG_1809904A0A1W2PP81 198 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 A0A1W2PPE2 198 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 A0A1W2PR64 198 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 FRMD3A2A2Y4 597 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 EFCAB8A8MWE9 144 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 BTBD18B2RXH4 712 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SYN3O14994 580 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SCAMP1O15126 338 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GRM6O15303 877 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZBTB43O43298 467 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 TULP3O75386 442 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CSPG5O95196 566 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SNX4O95219 450 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 KNG1P01042 644 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 VIPP01282 170 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 TUBBP07437 444 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GJB1P08034 283 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GNAI3P08754 354 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GAAP10253 952 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 ATF2P15336 505 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 GYPEP15421 78 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 SAT1P21673 171 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 CD6P30203 668 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTPN7P35236 360 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 MSX2P35548 267 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 PBX3P40426 434 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 MTHFRP42898 656 aa4.54□□□□□ -1.68
HMGB1P21-201ENST00000502313 LIMS1P48059 325 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms