RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PRLRP16471 622 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 C5AR1P21730 350 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 DGKAP23743 735 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 DRD3P35462 400 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 EMP3P54852 163 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 TBX4P57082 545 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 NFKB2Q00653 900 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ECT2LQ008S8 904 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF211Q13398 564 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ZSCAN23Q3MJ62 389 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF542PQ5EBM4 170 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 C6orf132Q5T0Z8 1188 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 FAM186BQ8IYM0 893 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 CEP57L1Q8IYX8 460 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 SEMA4DQ92854 862 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 MED8Q96G25 268 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 WBP1Q96G27 269 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 KLHDC7BQ96G42 594 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 LMLNQ96KR4 655 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 CALN1Q9BXU9 219 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 FAM117AQ9C073 453 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 POLR1BQ9H9Y6 1135 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 FZD3Q9NPG1 666 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ABCC13Q9NSE7 274 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 ARHGAP20Q9P2F6 1191 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 HESX1Q9UBX0 185 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 CYTH4Q9UIA0 394 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 STOML2Q9UJZ1 356 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 SATB2Q9UPW6 733 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 HEMK1Q9Y5R4 338 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-209ENST00000498725 KIF26BQ2KJY2 2108 aa9.44□□□□□ -0.9
CCDC171-209ENST00000498725 PMS2P1A4D2B8 440 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 XPO1O14980 1071 aaKnown RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LATO43561 262 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 MAGEC1O60732 1142 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 PPP6R2O75170 966 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LATS1O95835 1130 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 SRPRAP08240 638 aaKnown RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 THEGLP0DJG4 465 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 NR2F2P24468 414 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LSSP48449 732 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 DAOAP59103 153 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 CUL4AQ13619 759 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 ARHGAP17Q68EM7 881 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 CRTC1Q6UUV9 634 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LURAP1LQ8IV03 231 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 UNC45BQ8IWX7 931 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LGI2Q8N0V4 545 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 LSMEM2Q8N112 164 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 OR4C6Q8NH72 309 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 MAPK15Q8TD08 544 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 CLEC4CQ8WTT0 213 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 APOLD1Q96LR9 279 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF396Q96N95 335 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 DPH1Q9BZG8 443 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 NUCKS1Q9H1E3 243 aaKnown RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 ZSCAN16Q9H4T2 348 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 MAGEF1Q9HAY2 307 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 ASCL3Q9NQ33 180 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 THSD1Q9NS62 852 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 MORC2Q9Y6X9 1032 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-209ENST00000498725 COL6A6A6NMZ7 2263 aa9.43□□□□□ -0.9
CCDC171-209ENST00000498725 HECTD1Q9ULT8 2610 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 ITIH6Q6UXX5 1313 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 CPED1A4D0V7 1026 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 IRAK2O43187 625 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
CCDC171-209ENST00000498725 NEBLO76041 1014 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 LUC7L3O95232 432 aaKnown RBP9.42□□□□□ -0.9
CCDC171-209ENST00000498725 CALCAP01258 141 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 LTFP02788 710 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 ZNF18P17022 549 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 RBMS1P29558 406 aaKnown RBP9.42□□□□□ -0.9
CCDC171-209ENST00000498725 NNMTP40261 264 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 ME1P48163 572 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 ERVPABLB-1P60509 514 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 NUCB2P80303 420 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 CNTN1Q12860 1018 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 SETMARQ53H47 684 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-209ENST00000498725 DCAF6Q58WW2 860 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 MPP7Q5T2T1 576 aa9.42□□□□□ -0.9
CCDC171-209ENST00000498725 CDCP2Q5VXM1 449 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms