RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ITGAVP06756 1048 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SLC2A3P11169 496 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 CTSOP43234 321 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 OXCT1P55809 520 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SULT2A1Q06520 285 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 CYP4F3Q08477 520 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 ACAP1Q15027 740 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SMAD1Q15797 465 aaKnown RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 COL28A1Q2UY09 1125 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 ZC3H12AQ5D1E8 599 aaKnown RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SYPL2Q5VXT5 272 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 PDZD3Q86UT5 571 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TMPRSS12Q86WS5 348 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 CHSY1Q86X52 802 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 ARHGEF19Q8IW93 802 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 ATP6V0D2Q8N8Y2 350 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 OR14C36Q8NHC7 312 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 NELFBQ8WX92 580 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 RNF34Q969K3 372 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 MARVELD3Q96A59 401 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 MYEOVQ96EZ4 313 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 RPL10LQ96L21 214 aaKnown RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SLC6A18Q96N87 628 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 POPDC2Q9HBU9 364 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 UBE2TQ9NPD8 197 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 MAN1B1Q9UKM7 699 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 CNTN6Q9UQ52 1028 aa12.43□□□□□ -0.42
CNOT4-211ENST00000498534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
CNOT4-211ENST00000498534 FAM149AA5PLN7 773 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 E9PAM4 449 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 YKT6O15498 198 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TRUB2O95900 331 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 AFPP02771 609 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 C1SP09871 688 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 JUPP14923 745 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TACR2P21452 398 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 PSMD8P48556 350 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 CDK17Q00537 523 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 ELAVL3Q14576 367 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 MEA1Q16626 185 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 RAP1GAP2Q684P5 730 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 DENND1BQ6P3S1 775 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 DHRS13Q6UX07 377 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 DSG4Q86SJ6 1040 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TMEM110Q86TL2 294 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 PRPF39Q86UA1 669 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 MARCH9Q86YJ5 346 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 GATAD2AQ86YP4 633 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TRIM59Q8IWR1 403 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 APCDD1Q8J025 514 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 STK40Q8N2I9 435 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 PTPRN2Q92932 1015 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 SERAC1Q96JX3 654 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 INTS2Q9H0H0 1204 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
CNOT4-211ENST00000498534 PCDHGA1Q9Y5H4 931 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 TMEM131Q92545 1883 aa12.42□□□□□ -0.42
CNOT4-211ENST00000498534 ITIH6Q6UXX5 1313 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 MUC22E2RYF6 1773 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-211ENST00000498534 TLR4O00206 839 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 ENC1O14682 589 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 THAP12O43422 761 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 HNF1BP35680 557 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 MTA1Q13330 715 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 BECN1Q14457 450 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 KCNJ12Q14500 433 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 ACCSLQ4AC99 568 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 EFHC1Q5JVL4 640 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 RABGAP1LQ5R372 815 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 FAM46CQ5VWP2 391 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 AADATQ8N5Z0 425 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 LRIG1Q96JA1 1093 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
CNOT4-211ENST00000498534 SPAG5Q96R06 1193 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 SRRTQ9BXP5 876 aaKnown RBP12.41□□□□□ -0.42
CNOT4-211ENST00000498534 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 FAM204AQ9H8W3 233 aa12.41□□□□□ -0.42
CNOT4-211ENST00000498534 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms