RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CT47A1Q5JQC4 288 aaPredicted RBP19.14■□□□□ 0.65
PRKCB-209ENST00000498058 TMPRSS7Q7RTY8 843 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 IRF2BP1Q8IU81 584 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 DEFB106AQ8N104 65 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 MDM1Q8TC05 714 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 BTN2A3PQ96KV6 586 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 CPXM1Q96SM3 734 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 THAP9Q9H5L6 903 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 SCML1Q9UN30 329 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 NCKAP1Q9Y2A7 1128 aa19.14■□□□□ 0.65
PRKCB-209ENST00000498058 LAMA5O15230 3695 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 TARSL2A2RTX5 802 aaKnown RBP19.13■□□□□ 0.65
PRKCB-209ENST00000498058 PLK4O00444 970 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 MED7O43513 233 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 PCDHGA12O60330 932 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 RNASEH2AO75792 299 aaKnown RBP19.13■□□□□ 0.65
PRKCB-209ENST00000498058 APOEP02649 317 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 PDGFRAP16234 1089 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 PSMD8P48556 350 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 TYRO3Q06418 890 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 CXorf57Q6NSI4 855 aaKnown RBP19.13■□□□□ 0.65
PRKCB-209ENST00000498058 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 CCAR2Q8N163 923 aaKnown RBP19.13■□□□□ 0.65
PRKCB-209ENST00000498058 ALG14Q96F25 216 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 SLC2A13Q96QE2 648 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 CDC6Q99741 560 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 NAT10Q9H0A0 1025 aaKnown RBP19.13■□□□□ 0.65
PRKCB-209ENST00000498058 ADAMTS1Q9UHI8 967 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 LHX6Q9UPM6 363 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 APC2O95996 2303 aa19.13■□□□□ 0.65
PRKCB-209ENST00000498058 SYNJ2BP-COX16A0A087WUM0 186 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 A0A1B0GTQ1 180 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 EDDM13A0A1B0GTR0 161 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 A0A1W2PR77 199 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 VILLO15195 856 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 GRAP2O75791 330 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 DRD3P35462 400 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 GGCXP38435 758 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 CCT8P50990 548 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 RACK1P63244 317 aaKnown RBP19.12■□□□□ 0.65
PRKCB-209ENST00000498058 CENPCQ03188 943 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 FBXL22Q6P050 247 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 GATAD2AQ86YP4 633 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 PASD1Q8IV76 773 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 FRS2Q8WU20 508 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 SHC3Q92529 594 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 SIX2Q9NPC8 291 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.12■□□□□ 0.65
PRKCB-209ENST00000498058 COX16Q9P0S2 106 aa19.12■□□□□ 0.65
PRKCB-209ENST00000498058 CELSR3Q9NYQ7 3312 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 F5H5T6 163 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 CBX4O00257 560 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 RNASEH1O60930 286 aaKnown RBP19.11■□□□□ 0.65
PRKCB-209ENST00000498058 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
PRKCB-209ENST00000498058 USP8P40818 1118 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 PLK1P53350 603 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 ADPRHP54922 357 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 PPP2CBP62714 309 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 PPP2CAP67775 309 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 SUZ12Q15022 739 aaKnown RBP19.11■□□□□ 0.65
PRKCB-209ENST00000498058 OTUD1Q5VV17 481 aaPredicted RBP19.11■□□□□ 0.65
PRKCB-209ENST00000498058 C19orf48Q6RUI8 117 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 FAM183BPQ6ZVS7 135 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 ADAT2Q7Z6V5 191 aaKnown RBP19.11■□□□□ 0.65
PRKCB-209ENST00000498058 C14orf80Q86SX3 495 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 ATP6V0D2Q8N8Y2 350 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 OR2T34Q8NGX1 318 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 OMDQ99983 421 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 DDIT4Q9NX09 232 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 SARDHQ9UL12 918 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 FZD4Q9ULV1 537 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 GPSM3Q9Y4H4 160 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 CEP83Q9Y592 693 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 ITPR1Q14643 2758 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 ACACAQ13085 2346 aa19.11■□□□□ 0.65
PRKCB-209ENST00000498058 FAM149AA5PLN7 773 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 TNFSF14O43557 240 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 MOCS3O95396 460 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 ERBB2P04626 1255 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 GOT1P17174 413 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 PON1P27169 355 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 GRK6P43250 576 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 CAMK2BQ13554 666 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 DPY19L2P1Q6NXN4 242 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 OLFML1Q6UWY5 402 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 ENOSF1Q7L5Y1 443 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 CREBRFQ8IUR6 639 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 CCDC117Q8IWD4 279 aaPredicted RBP19.1■□□□□ 0.65
PRKCB-209ENST00000498058 FAM131CQ96AQ9 280 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 TRIM62Q9BVG3 475 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 ACE2Q9BYF1 805 aaPredicted RBP19.1■□□□□ 0.65
PRKCB-209ENST00000498058 CCDC86Q9H6F5 360 aaKnown RBP19.1■□□□□ 0.65
PRKCB-209ENST00000498058 FAM204AQ9H8W3 233 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 ANLNQ9NQW6 1124 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 APEX2Q9UBZ4 518 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 RWDD2AQ9UIY3 292 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 PCDHGC3Q9UN70 934 aa19.1■□□□□ 0.65
PRKCB-209ENST00000498058 ARID1BQ8NFD5 2236 aaPredicted RBP19.1■□□□□ 0.65
PRKCB-209ENST00000498058 COL5A1P20908 1838 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms