RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-209	ENST00000497871	WDTC1	Q8N5D0	677 aa		18.81	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PPP1R9B	Q96SB3	815 aa		18.81	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ELF4	Q99607	663 aa	Predicted RBP	18.81	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ASNSD1	Q9NWL6	643 aa		18.81	■□□□□ 0.6
ATPAF2-209	ENST00000497871	DSP	P15924	2871 aa	Known RBP	18.81	■□□□□ 0.6
ATPAF2-209	ENST00000497871	LAMA5	O15230	3695 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	BECN2	A8MW95	431 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GADD45B	O75293	160 aa	Predicted RBP	18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	IL1B	P01584	269 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CCR1	P32246	355 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PSMD8	P48556	350 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	VASP	P50552	380 aa	Predicted RBP	18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	MTA1	Q13330	715 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	EFHC1	Q5JVL4	640 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	RABGAP1L	Q5R372	815 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SMYD5	Q6GMV2	418 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GJB7	Q6PEY0	223 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	DEFB106A	Q8N104	65 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	AADAT	Q8N5Z0	425 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	OR14C36	Q8NHC7	312 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	MDM1	Q8TC05	714 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PPP1R13B	Q96KQ4	1090 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SLC2A13	Q96QE2	648 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CRACR2A	Q9BSW2	395 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FAM204A	Q9H8W3	233 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	AASDHPPT	Q9NRN7	309 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	DKK4	Q9UBT3	224 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GPSM3	Q9Y4H4	160 aa		18.8	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ATRX	P46100	2492 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871		A0A1B0GVM2	712 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TCAF2	A6NFQ2	919 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	HSF2BP	O75031	334 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	WNT1	P04628	370 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PDGFRA	P16234	1089 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SLC9A1	P19634	815 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	MZF1	P28698	734 aa	Predicted RBP	18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CD38	P28907	300 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	USP8	P40818	1118 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	STK19	P49842	368 aa	Predicted RBP	18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	IL9R	Q01113	521 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SMAD1	Q15797	465 aa	Known RBP	18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PRAMEF14	Q5SWL7	426 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FBXL22	Q6P050	247 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GBP6	Q6ZN66	633 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CREBRF	Q8IUR6	639 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	RNF34	Q969K3	372 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SPAG5	Q96R06	1193 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	DDIT4	Q9NX09	232 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	APEX2	Q9UBZ4	518 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FTSJ1	Q9UET6	329 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	RWDD2A	Q9UIY3	292 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PCDHGC3	Q9UN70	934 aa		18.79	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3D	A0A087WVF3	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3I	A0A087WXS9	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3E	A0A087X179	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3K	A0A087X1G2	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871		A0A1W2PR77	199 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3L	B9A6J9	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3H	P0C7X1	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ADPRH	P54922	357 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SNX16	P57768	344 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ARHGAP44	Q17R89	818 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3G	Q6DHY5	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3C	Q6IPX1	549 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CXorf57	Q6NSI4	855 aa	Known RBP	18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FRS2	Q8WU20	508 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SHC3	Q92529	594 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FAM131C	Q96AQ9	280 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CPXM1	Q96SM3	734 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	KDM4C	Q9H3R0	1056 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GDF3	Q9NR23	364 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GTF3C3	Q9Y5Q9	886 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PLXNB3	Q9ULL4	1909 aa		18.78	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GTPBP10	A4D1E9	387 aa	Known RBP	18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	TRABD2B	A6NFA1	517 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	WNT9A	O14904	365 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	YKT6	O15498	198 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SLC7A4	O43246	635 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	LAT	O43561	262 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ITGAV	P06756	1048 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	HOXB3	P14651	431 aa	Predicted RBP	18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	PTK2	Q05397	1052 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CAMK2B	Q13554	666 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	AUH	Q13825	339 aa	Known RBP	18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SHB	Q15464	509 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	EXOC3L4	Q17RC7	722 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SLC45A4	Q5BKX6	768 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	FAM46C	Q5VWP2	391 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	C19orf48	Q6RUI8	117 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	DSG4	Q86SJ6	1040 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	CIR1	Q86X95	450 aa	Predicted RBP	18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	GATAD2A	Q86YP4	633 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SAP25	Q8TEE9	199 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	ALG14	Q96F25	216 aa		18.77	■□□□□ 0.6
ATPAF2-209	ENST00000497871	SERAC1	Q96JX3	654 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms