RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LOXL3P58215 753 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 RAP2BP61225 183 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 RPL15P61313 204 aaKnown RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 CEBPZQ03701 1054 aaKnown RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 SCN1BQ07699 218 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 KLHL30Q0D2K2 578 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ABHD18Q0P651 414 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ALCAMQ13740 583 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 RTP5Q14D33 572 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ACOX1Q15067 660 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ZRANB3Q5FWF4 1079 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 DCAF17Q5H9S7 520 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 NHSL2Q5HYW2 709 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 COLEC12Q5KU26 742 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 OLFML2BQ68BL8 750 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ANKRD40Q6AI12 368 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 LAYNQ6UX15 382 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 FAM217AQ8IXS0 508 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 FSTL5Q8N475 847 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 PLD5Q8N7P1 536 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 IPMKQ8NFU5 416 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 OR5M3Q8NGP4 307 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 KCNE4Q8WWG9 221 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 TMCO6Q96DC7 493 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ZBTB45Q96K62 511 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 C1orf74Q96LT6 269 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 SYT17Q9BSW7 474 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 CTDSP1Q9GZU7 261 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ENKD1Q9H0I2 346 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 KCNK9Q9NPC2 374 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 MBNL1Q9NR56 388 aaKnown RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 SH3BP4Q9P0V3 963 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 VAV3Q9UKW4 847 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 RAB21Q9UL25 225 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 SLC27A6Q9Y2P4 619 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 EPN1Q9Y6I3 576 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-224ENST00000497488 CAPN7Q9Y6W3 813 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 IGSF1Q8N6C5 1336 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 FHOD3Q2V2M9 1422 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ABCC10Q5T3U5 1492 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 KDM5BQ9UGL1 1544 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ABCA8O94911 1581 aa6.38□□□□□ -1.39
BRCA1-224ENST00000497488 ZCCHC11Q5TAX3 1644 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SPAG9O60271 1321 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3DA0A087WVF3 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3IA0A087WXS9 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3EA0A087X179 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3KA0A087X1G2 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 LRRD1A4D1F6 860 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3BA6NDS4 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3FA6NER0 549 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3LB9A6J9 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 POLRMTO00411 1230 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 ZNF263O14978 683 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 PGRMC2O15173 223 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CYP26A1O43174 497 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SASH1O94885 1247 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 GCNT3O95395 438 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 KNG1P01042 644 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 HMGCRP04035 888 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 MPOP05164 745 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 JUNP05412 331 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SUPT20HL2P0C7V6 817 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3HP0C7X1 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 VSIG10L2P0DP72 767 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 RPS2P15880 293 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CHRM3P20309 590 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 UQCRC1P31930 480 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CCR10P46092 362 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 PIP4K2AP48426 406 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 GZMKP49863 264 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 GATMP50440 423 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CLRN1P58418 232 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 EFNB1P98172 346 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TIAL1Q01085 375 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 NIPAL4Q0D2K0 466 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 ITGA7Q13683 1181 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 PTK6Q13882 451 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 UBXN2BQ14CS0 331 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 MEP1BQ16820 701 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SUPT20HL1Q3ZLR7 823 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 PLEKHN1Q494U1 663 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 GLIPR1L2Q4G1C9 344 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 RUNDC3AQ59EK9 446 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SPDYAQ5MJ70 313 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CST9LP1Q5W188 147 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3GQ6DHY5 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3CQ6IPX1 549 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CCDC144NLQ6NUI1 221 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CLEC9AQ6UXN8 241 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 KRT27Q7Z3Y8 459 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 RHPN2Q8IUC4 686 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 IGDCC3Q8IVU1 814 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TBC1D3Q8IZP1 549 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 FITM2Q8N6M3 262 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 ZBTB44Q8NCP5 570 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms