RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SCG5P05408 212 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RB1P06400 928 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 HSMCR30P0CW71 290 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CHN1P15882 459 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 VCLP18206 1134 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ETV5P41161 510 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RECQLP46063 649 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CPT1AP50416 773 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 AFF3P51826 1226 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CACNB3P54284 484 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TSPAN5P62079 268 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 YBX1P67809 324 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RPP30P78346 268 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNJ10P78508 379 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GUCY1A3Q02108 690 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CDC20Q12834 499 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC14A1Q13336 389 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ADAM15Q13444 863 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DRP2Q13474 957 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RAPSNQ13702 412 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GIT2Q14161 759 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 EFHC1Q5JVL4 640 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 C1orf185Q5T7R7 199 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM171BQ6P995 826 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CNKSR3Q6P9H4 555 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PIK3AP1Q6ZUJ8 805 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 STXBP4Q6ZWJ1 553 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PLA2G4DQ86XP0 818 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DNAAF5Q86Y56 855 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TMTC1Q8IUR5 882 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 MAP7D3Q8IWC1 876 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SCUBE1Q8IWY4 988 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KIAA0319LQ8IZA0 1049 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC38A6Q8IZM9 456 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKFN1Q8N957 763 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ANGPTL6Q8NI99 470 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC35G2Q8TBE7 412 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SH3RF2Q8TEC5 729 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GANCQ8TET4 914 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TSPEARQ8WU66 669 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DDX1Q92499 740 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 WASF1Q92558 559 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CIDECQ96AQ7 238 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RRP36Q96EU6 259 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SIGLEC10Q96LC7 697 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF560Q96MR9 790 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CAMK1GQ96NX5 476 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC2A13Q96QE2 648 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TBCDQ9BTW9 1192 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC28BQ9BUN5 200 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 BRIP1Q9BX63 1249 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TTYH3Q9C0H2 523 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CARD9Q9H257 536 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DPH5Q9H2P9 285 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLITRK6Q9H5Y7 841 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CERS4Q9HA82 394 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC38A10Q9HBR0 1119 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PDE7BQ9NP56 450 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NMRK2Q9NPI5 230 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 AGPAT3Q9NRZ7 376 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT84Q9NSB2 600 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 WWOXQ9NZC7 414 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 UBA2Q9UBT2 640 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RCOR1Q9UKL0 485 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 POLHQ9Y253 713 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 MIA2Q96PC5 1412 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CNTLNQ9NXG0 1405 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KIF15Q9NS87 1388 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM237AA0A1B0GTK4 181 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PMS2P1A4D2B8 440 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PGPEP1LA6NFU8 196 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 OTOL1A6NHN0 477 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TMEM114B3SHH9 223 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 B8ZZF3 427 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 F8W8V4 182 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 XPO1O14980 1071 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TRAPPC3O43617 180 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PRICKLE3O43900 615 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SSX5O60225 188 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ECE2O60344 883 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NPHS1O60500 1241 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RFPL3O75679 317 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PRKD3O94806 890 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 ASNSP08243 561 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 POU2F2P09086 479 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 QDPRP09417 244 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 INHBBP09529 407 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DHRS4L1P0CG22 281 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 CLUP10909 449 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 APEHP13798 732 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GRK3P35626 688 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT6CP48668 564 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PRIM2P49643 509 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RGS7P49802 495 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DNM2P50570 870 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 HSD17B4P51659 736 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 RPL11P62913 178 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NKX3-2P78367 333 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 GCNT1Q02742 428 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SLFN5Q08AF3 891 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms