RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CHI3L2Q15782 390 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 RNF180Q86T96 592 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
GARNL3-220ENST00000496711 SKA1Q96BD8 255 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 CELF6Q96J87 481 aaKnown RBP13.35□□□□□ -0.27
GARNL3-220ENST00000496711 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 CPNE1Q99829 537 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 KCNK13Q9HB14 408 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 SAR1AQ9NR31 198 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 RGS18Q9NS28 235 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 STK38LQ9Y2H1 464 aa13.35□□□□□ -0.27
GARNL3-220ENST00000496711 FGF10O15520 208 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-220ENST00000496711 HNRNPCL1O60812 293 aaKnown RBP13.34□□□□□ -0.27
GARNL3-220ENST00000496711 DNAJC6O75061 913 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 HAUS5O94927 633 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 ERVK-10P10266 1014 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 GRIK1P39086 918 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 RASSF2P50749 326 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 ACLYP53396 1101 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 CAP1Q01518 475 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 RWDD4Q6NW29 188 aaKnown RBP13.34□□□□□ -0.27
GARNL3-220ENST00000496711 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-220ENST00000496711 DPF3Q92784 378 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 TMEM237Q96Q45 408 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 HAPLN3Q96S86 360 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 HEY2Q9UBP5 337 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 DOCK4Q8N1I0 1966 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 TTC3P53804 2025 aa13.34□□□□□ -0.27
GARNL3-220ENST00000496711 TNFRSF10BO14763 440 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 B4GALT3O60512 393 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 CBX6O95503 412 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 EOMESO95936 686 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 TOP3BO95985 862 aaKnown RBP13.33□□□□□ -0.27
GARNL3-220ENST00000496711 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 T-ENOLP0DO92 83 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 HOXC13P31276 330 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 CCR1P32246 355 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 SLC8A1P32418 973 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 PDE1BQ01064 536 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 OCRLQ01968 901 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.27
GARNL3-220ENST00000496711 CTC1Q2NKJ3 1217 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 GRTP1Q5TC63 336 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 TMEM135Q86UB9 458 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 ATPAF2Q8N5M1 289 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 FCRL3Q96P31 734 aaPredicted RBP13.33□□□□□ -0.27
GARNL3-220ENST00000496711 TSGA13Q96PP4 275 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 SIK2Q9H0K1 926 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 IL1RAPL1Q9NZN1 696 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 NUMBLQ9Y6R0 609 aa13.33□□□□□ -0.27
GARNL3-220ENST00000496711 FAM237BA0A1B0GVD1 139 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 TMEM189-UBE2V1I3L0A0 370 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 AP3B1O00203 1094 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 DFFAO00273 331 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 PSMD3O43242 534 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 SNNO75324 88 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-220ENST00000496711 PAGE1O75459 146 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 OR4Q2P0C623 313 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 MYL2P10916 166 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 CKBP12277 381 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 SERPINB3P29508 390 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 NPY2RP49146 381 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 DSC1Q08554 894 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 PPP2R5DQ14738 602 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
GARNL3-220ENST00000496711 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 N4BP2L1Q5TBK1 243 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-220ENST00000496711 MANEALQ5VSG8 457 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 ZSCAN18Q8TBC5 510 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-220ENST00000496711 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 CASP10Q92851 521 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 SLC7A6OSQ96CW6 309 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-220ENST00000496711 TBC1D31Q96DN5 1066 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 RBBP8Q99708 897 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 IL22Q9GZX6 179 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 CATSPERBQ9H7T0 1116 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 KCNK4Q9NYG8 393 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 DCDC2Q9UHG0 476 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 LNPEPQ9UIQ6 1025 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.28
GARNL3-220ENST00000496711 ZCWPW2A0A1B0GU75 182 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 MAGEB16A2A368 324 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-220ENST00000496711 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
GARNL3-220ENST00000496711 JCHAINP01591 159 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CCNCP24863 283 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 DNAJB2P25686 324 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CDK18Q07002 472 aa13.32□□□□□ -0.28
GARNL3-220ENST00000496711 CDH17Q12864 832 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms