RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MAGEB5Q9BZ81 275 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 OSGEPQ9NPF4 335 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PLK2Q9NYY3 685 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 CDH22Q9UJ99 828 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PCDHA3Q9Y5H8 950 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 GOLGA8CPA6NN73 597 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SPECC1L-ADORA2AF8WAN1 911 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TRDMT1O14717 391 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ERCC2P18074 760 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 KDELR1P24390 212 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SERPINA4P29622 427 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TNFRSF4P43489 277 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 KCNT1Q5JUK3 1230 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 FBXL22Q6P050 247 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 KIAA1324Q6UXG2 1013 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SLC44A3Q8N4M1 653 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 OTUD6BQ8N6M0 293 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 CAPZA3Q96KX2 299 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 OMDQ99983 421 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TRHDEQ9UKU6 1024 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 WDR81Q562E7 1941 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 GJB6O95452 261 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ASGR2P07307 311 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SRPRAP08240 638 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 FECHP22830 423 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 CCZ1BP86790 482 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 CCZ1P86791 482 aaPredicted RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SCAPQ12770 1279 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TCEAL1Q15170 157 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SIX5Q8N196 739 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 BTBD6Q96KE9 485 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 HEMGNQ9BXL5 484 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TSPYL1Q9H0U9 437 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PRM3Q9NNZ6 103 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SCUBE2Q9NQ36 999 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PIGVQ9NUD9 493 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SPATA6Q9NWH7 488 aaPredicted RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ARHGEF38Q9NXL2 777 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 TPX2Q9ULW0 747 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 UTP11Q9Y3A2 253 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 FAM170BA6NMN3 283 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ESPNB1AK53 854 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 LRCH4O75427 683 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 LRIG2O94898 1065 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 EPHX1P07099 455 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 DLDP09622 509 aaKnown RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 LTBRP36941 435 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 CCR3P51677 355 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 GEMP55040 296 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ECT2LQ008S8 904 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 NRG1Q02297 640 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 SLC5A9Q2M3M2 681 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 E4F1Q66K89 784 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 PDCD6IPQ8WUM4 868 aaKnown RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 ZNF599Q96NL3 588 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ABCB8Q9NUT2 735 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 KCTD5Q9NXV2 234 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 DUSP12Q9UNI6 340 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 HS3ST4Q9Y661 456 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PTPRSQ13332 1948 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 EDDM13A0A1B0GTR0 161 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 GRID2IPA4D2P6 1211 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 C3orf70A6NLC5 250 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 RASA4BC9J798 803 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 HOXC11O43248 304 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 AP5Z1O43299 807 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 RASA4O43374 803 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 SERPINF2P08697 491 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 DPP6P42658 865 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PPM1FP49593 454 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 PTP4A2Q12974 167 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PIK3R6Q5UE93 754 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 CFAP52Q8N1V2 620 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 DCAF4L2Q8NA75 395 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 FIBINQ8TAL6 211 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PSMB7Q99436 277 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ADGRE3Q9BY15 652 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 LMAN1LQ9HAT1 526 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 TRPV5Q9NQA5 729 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 RAD18Q9NS91 495 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ELOVL2Q9NXB9 296 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 SIT1Q9Y3P8 196 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 RALGAPA2Q2PPJ7 1873 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PTPRZ1P23471 2315 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 ZNF487B1APH4 448 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ECEL1O95672 775 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 FGGP02679 453 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 CYP2A6P11509 494 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 AMPD1P23109 780 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 VCPP55072 806 aaKnown RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 DPYSL2Q16555 572 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 USP39Q53GS9 565 aaKnown RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 ANKRD20A8PQ5CZ79 823 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PCGF5Q86SE9 256 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PRCCQ92733 491 aaPredicted RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 RNF157Q96PX1 679 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms