RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
SF3B1-212ENST00000496458 KLBQ86Z14 1044 aa6.28□□□□□ -1.4
SF3B1-212ENST00000496458 CACNA2D3Q8IZS8 1091 aa6.28□□□□□ -1.4
SF3B1-212ENST00000496458 ZNF419Q96HQ0 510 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-212ENST00000496458 PDE11AQ9HCR9 933 aa6.28□□□□□ -1.4
SF3B1-212ENST00000496458 FZD3Q9NPG1 666 aa6.28□□□□□ -1.4
SF3B1-212ENST00000496458 KCNJ18B7U540 433 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 CDK7P50613 346 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 MORC3Q14149 939 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 C9orf47Q6ZRZ4 202 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 ANKS1BQ7Z6G8 1248 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 TMEM200AQ86VY9 491 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 SAMD14Q8IZD0 417 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-212ENST00000496458 STT3BQ8TCJ2 826 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 SLC2A12Q8TD20 617 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 TMEM174Q8WUU8 243 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 ARL15Q9NXU5 204 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 DTX4Q9Y2E6 619 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 PKP3Q9Y446 797 aa6.27□□□□□ -1.41
SF3B1-212ENST00000496458 PROB1E7EW31 1015 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 H0YGN5 161 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 GRM8O00222 908 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ALPLP05186 524 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 TBXAS1P24557 533 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-212ENST00000496458 CHRNA5P30532 468 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 STAT1P42224 750 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ALG10Q5BKT4 473 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ALG10BQ5I7T1 473 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ENTPD8Q5MY95 495 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 SLC30A9Q6PML9 568 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ZNF517Q6ZMY9 492 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-212ENST00000496458 SYNE3Q6ZMZ3 975 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 PELI3Q8N2H9 469 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ENDOVQ8N8Q3 282 aaKnown RBP6.26□□□□□ -1.41
SF3B1-212ENST00000496458 FAM110DQ8TAY7 271 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-212ENST00000496458 LPAR1Q92633 364 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 CAMK1GQ96NX5 476 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 TRAPPC9Q96Q05 1148 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 HDHD5Q9BXW7 423 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 MAGEH1Q9H213 219 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 ZNF304Q9HCX3 659 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 NDUFAF4Q9P032 175 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 GRHPRQ9UBQ7 328 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 SLC25A13Q9UJS0 675 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 RCE1Q9Y256 329 aa6.26□□□□□ -1.41
SF3B1-212ENST00000496458 HMX3A6NHT5 357 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 CYP21A2P08686 494 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 PRPH2P23942 346 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 POLD2P49005 469 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 HTR6P50406 440 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 P2RX3P56373 397 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 RHBDL3P58872 404 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 RHAGQ02094 409 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 ZBTB16Q05516 673 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 CDK18Q07002 472 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 GPR162Q16538 588 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 DGAT2L7PQ6IED9 249 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 CCDC174Q6PII3 467 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 KDELC2Q7Z4H8 507 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 CCDC25Q86WR0 208 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 GPSM1Q86YR5 675 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 ZDHHC17Q8IUH5 632 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 ASB5Q8WWX0 329 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 LTV1Q96GA3 475 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-212ENST00000496458 PIGSQ96S52 555 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 NPAS1Q99742 590 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 TASP1Q9H6P5 420 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 KCND3Q9UK17 655 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 BAG5Q9UL15 447 aa6.25□□□□□ -1.41
SF3B1-212ENST00000496458 TCRBV7S3A2A0A539 114 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 MDM4O15151 490 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 HOXB2P14652 356 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 PDCLQ13371 301 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 RAPGEF1Q13905 1077 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 TIGD6Q17RP2 521 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 TUBB8Q3ZCM7 444 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 TANGO2Q6ICL3 276 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 LVRNQ6Q4G3 990 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 VPS52Q8N1B4 723 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 TMEM217Q8N7C4 229 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 OTUD7AQ8TE49 926 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-212ENST00000496458 KCNJ9Q92806 393 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 ARRDC3Q96B67 414 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 FRMD8Q9BZ67 464 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-212ENST00000496458 ARHGAP39Q9C0H5 1083 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 ABHD16BQ9H3Z7 469 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 MAP6D1Q9H9H5 199 aa6.24□□□□□ -1.41
SF3B1-212ENST00000496458 H0Y3Z8 333 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 IFNA2P01563 188 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 LCKP06239 509 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 HOXB9P17482 250 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-212ENST00000496458 FOXO1Q12778 655 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 LRRC24Q50LG9 513 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 RINLQ6ZS11 566 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 SLC25A41Q8N5S1 370 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 INPP5DQ92835 1189 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-212ENST00000496458 TRIM31Q9BZY9 425 aa6.23□□□□□ -1.41
SF3B1-212ENST00000496458 MRPL44Q9H9J2 332 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms