RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 PITRM1Q5JRX3 1037 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 KIAA1211LQ6NV74 962 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 DCUN1D2Q6PH85 259 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 C14orf80Q86SX3 495 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 FAM160A2Q8N612 972 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 NTAN1Q96AB6 310 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 SPACA7Q96KW9 195 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 MRGPRX1Q96LB2 322 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 TPSD1Q9BZJ3 242 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 OSBPL2Q9H1P3 480 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 FBRSQ9HAH7 460 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 PPARGC1AQ9UBK2 798 aaKnown RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 INTS6Q9UL03 887 aaKnown RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 MYO15AQ9UKN7 3530 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 E9PAM4 449 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 GJB6O95452 261 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 EPHX1P07099 455 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 NDUFV2P19404 249 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 PRKCHP24723 683 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 AIF1P55008 147 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 HDAC4P56524 1084 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 RPL7AP62424 266 aaKnown RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 ECT2LQ008S8 904 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 CAMK2GQ13555 558 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 CDO1Q16878 200 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 PLEKHG6Q3KR16 790 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 PLK5Q496M5 336 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 SETD3Q86TU7 594 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 KBTBD6Q86V97 674 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 VSTM4Q8IW00 320 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 OR8K1Q8NGG5 319 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 CYB5D2Q8WUJ1 264 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 DUSP15Q9H1R2 295 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 PRDM16Q9HAZ2 1276 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 MRPL47Q9HD33 250 aaKnown RBP12.73□□□□□ -0.37
MRPL55-233ENST00000495899 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 ADAMTS1Q9UHI8 967 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 RAD54BQ9Y620 910 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 SCINQ9Y6U3 715 aa12.73□□□□□ -0.37
MRPL55-233ENST00000495899 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 TMEM191CA6NGB0 347 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 FOXD2O60548 495 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-233ENST00000495899 SRGAP2O75044 1071 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 TPM1P09493 284 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 NNMTP40261 264 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 SCAPQ12770 1279 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 LPAL2Q16609 132 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ARTNQ5T4W7 220 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 C6orf118Q5T5N4 469 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 SLC36A4Q6YBV0 504 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF783Q6ZMS7 281 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-233ENST00000495899 TMPRSS6Q8IU80 811 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 OR2T3Q8NH03 318 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 FNIP1Q8TF40 1166 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ALG14Q96F25 216 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 MRGPRX3Q96LB0 322 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 DNAJC7Q99615 494 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ITM2CQ9NQX7 267 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 TMPRSS4Q9NRS4 437 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 CNOT8Q9UFF9 292 aaKnown RBP12.72□□□□□ -0.37
MRPL55-233ENST00000495899 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 PCDHGA5Q9Y5G8 931 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
MRPL55-233ENST00000495899 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 DCLK1O15075 740 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 CCP110O43303 1012 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 CNTN5O94779 1100 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 GGCXP38435 758 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 IRAK1P51617 712 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 KRT83P78385 493 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 ZBTB16Q05516 673 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 HNRNPA1L2Q32P51 320 aaKnown RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 RAB6CQ53S08 254 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 ALFQ53S48 1182 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 MANEALQ5VSG8 457 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-233ENST00000495899 PMS2CLQ68D20 193 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 TMC6Q7Z403 805 aa12.71□□□□□ -0.37
MRPL55-233ENST00000495899 DCLK2Q8N568 766 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms