RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GOLGA8CPA6NN73 597 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 BECN2A8MW95 431 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 PLXNA2O75051 1894 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 GADD45BO75293 160 aaPredicted RBP23.97■■□□□ 1.43
COL27A1-208ENST00000494780 PLK1P53350 603 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 TAF5Q15542 800 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 RABGAP1LQ5R372 815 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 SMYD5Q6GMV2 418 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 CCAR2Q8N163 923 aaKnown RBP23.97■■□□□ 1.43
COL27A1-208ENST00000494780 SLC2A13Q96QE2 648 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 ELF4Q99607 663 aaPredicted RBP23.97■■□□□ 1.43
COL27A1-208ENST00000494780 CRACR2AQ9BSW2 395 aa23.97■■□□□ 1.43
COL27A1-208ENST00000494780 DMXL2Q8TDJ6 3036 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 A0A1B0GVM2 712 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 TCAF2A6NFQ2 919 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 WNT1P04628 370 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 PDGFRAP16234 1089 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 MZF1P28698 734 aaPredicted RBP23.96■■□□□ 1.43
COL27A1-208ENST00000494780 CCR1P32246 355 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 USP8P40818 1118 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 STK19P49842 368 aaPredicted RBP23.96■■□□□ 1.43
COL27A1-208ENST00000494780 IL9RQ01113 521 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 MTA1Q13330 715 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 KCNJ12Q14500 433 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 EFHC1Q5JVL4 640 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 GJB7Q6PEY0 223 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 DEFB106AQ8N104 65 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 WDTC1Q8N5D0 677 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 PPP1R9BQ96SB3 815 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 AASDHPPTQ9NRN7 309 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 DDIT4Q9NX09 232 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 FTSJ1Q9UET6 329 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 RWDD2AQ9UIY3 292 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 GPSM3Q9Y4H4 160 aa23.96■■□□□ 1.43
COL27A1-208ENST00000494780 HSF2BPO75031 334 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 IL1BP01584 269 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 SLC9A1P19634 815 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 CD38P28907 300 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 VASPP50552 380 aaPredicted RBP23.95■■□□□ 1.42
COL27A1-208ENST00000494780 ADPRHP54922 357 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 ARHGAP44Q17R89 818 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 GBP6Q6ZN66 633 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 CIR1Q86X95 450 aaPredicted RBP23.95■■□□□ 1.42
COL27A1-208ENST00000494780 OR14C36Q8NHC7 312 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 MDM1Q8TC05 714 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 SHC3Q92529 594 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 RNF34Q969K3 372 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 PPP1R13BQ96KQ4 1090 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 SPAG5Q96R06 1193 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 CPXM1Q96SM3 734 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 DKK4Q9UBT3 224 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 APEX2Q9UBZ4 518 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 PCDHGC3Q9UN70 934 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.42
COL27A1-208ENST00000494780 NYNRINQ9P2P1 1898 aaKnown RBP23.94■■□□□ 1.42
COL27A1-208ENST00000494780 A0A1W2PR77 199 aa23.94■■□□□ 1.42
COL27A1-208ENST00000494780 YKT6O15498 198 aa23.94■■□□□ 1.42
COL27A1-208ENST00000494780 SMAD1Q15797 465 aaKnown RBP23.94■■□□□ 1.42
COL27A1-208ENST00000494780 CXorf57Q6NSI4 855 aaKnown RBP23.94■■□□□ 1.42
COL27A1-208ENST00000494780 FBXL22Q6P050 247 aa23.94■■□□□ 1.42
COL27A1-208ENST00000494780 FRS2Q8WU20 508 aa23.94■■□□□ 1.42
COL27A1-208ENST00000494780 DSPP15924 2871 aaKnown RBP23.93■■□□□ 1.42
COL27A1-208ENST00000494780 SYNJ2BP-COX16A0A087WUM0 186 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 GTPBP10A4D1E9 387 aaKnown RBP23.93■■□□□ 1.42
COL27A1-208ENST00000494780 DRD3P35462 400 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 EXOC3L4Q17RC7 722 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 SLC45A4Q5BKX6 768 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.93■■□□□ 1.42
COL27A1-208ENST00000494780 DSG4Q86SJ6 1040 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 CREBRFQ8IUR6 639 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 FAM131CQ96AQ9 280 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 SERAC1Q96JX3 654 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 RPRD1AQ96P16 312 aaPredicted RBP23.93■■□□□ 1.42
COL27A1-208ENST00000494780 NOX5Q96PH1 765 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 KDM4CQ9H3R0 1056 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 GDF3Q9NR23 364 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 COX16Q9P0S2 106 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 KIAA1468Q9P260 1216 aa23.93■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3DA0A087WVF3 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3IA0A087WXS9 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3EA0A087X179 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3KA0A087X1G2 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3FA6NER0 549 aaPredicted RBP23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3LB9A6J9 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 SLC7A4O43246 635 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 LATO43561 262 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3HP0C7X1 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 VAV1P15498 845 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 SNX16P57768 344 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 PTK2Q05397 1052 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 SHBQ15464 509 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 PRAMEF14Q5SWL7 426 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3GQ6DHY5 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3CQ6IPX1 549 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 C11orf57Q6ZUT1 292 aaPredicted RBP23.92■■□□□ 1.42
COL27A1-208ENST00000494780 GATAD2AQ86YP4 633 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 PASD1Q8IV76 773 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TBC1D3Q8IZP1 549 aaPredicted RBP23.92■■□□□ 1.42
COL27A1-208ENST00000494780 SAP25Q8TEE9 199 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 ALG14Q96F25 216 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms