RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ZBTB16Q05516 673 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 GFPT1Q06210 699 aaPredicted RBP34.19■■■■□ 3.06
CBX4-203ENST00000494546 SULT2A1Q06520 285 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 CLEC16AQ2KHT3 1053 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 TTC31Q49AM3 519 aaPredicted RBP34.19■■■■□ 3.06
CBX4-203ENST00000494546 C5orf22Q49AR2 442 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 FILIP1LQ4L180 1135 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 DAB2IPQ5VWQ8 1189 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 CADM4Q8NFZ8 388 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 RSPH9Q9H1X1 276 aaPredicted RBP34.19■■■■□ 3.06
CBX4-203ENST00000494546 ADAM22Q9P0K1 906 aa34.19■■■■□ 3.06
CBX4-203ENST00000494546 SERPINF2P08697 491 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 NNMTP40261 264 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 PLK1P53350 603 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 ARID5BQ14865 1188 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 C9orf64Q5T6V5 341 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 DCAF12L1Q5VU92 463 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 LRRC31Q6UY01 552 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 FAM131BQ86XD5 332 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 OR52K2Q8NGK3 314 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 PPP1R9BQ96SB3 815 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 AGPAT1Q99943 283 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 FUCA2Q9BTY2 467 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 ITIH6Q6UXX5 1313 aa34.18■■■■□ 3.06
CBX4-203ENST00000494546 EDDM13A0A1B0GTR0 161 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 TARSL2A2RTX5 802 aaKnown RBP34.17■■■■□ 3.06
CBX4-203ENST00000494546 RNASEH1O60930 286 aaKnown RBP34.17■■■■□ 3.06
CBX4-203ENST00000494546 CNTN5O94779 1100 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 GJB6O95452 261 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 C7P10643 843 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 ACSL1P33121 698 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 CDO1Q16878 200 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 KLHL40Q2TBA0 621 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 UAP1L1Q3KQV9 507 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 ALFQ53S48 1182 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 BNIPLQ7Z465 357 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 RXFP2Q8WXD0 754 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 FEM1AQ9BSK4 669 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 GTPBP2Q9BX10 602 aaKnown RBP34.17■■■■□ 3.06
CBX4-203ENST00000494546 MIR1-1HGQ9H1L0 117 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 CAPN10Q9HC96 672 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 SUSD2Q9UGT4 822 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 VPS28Q9UK41 221 aa34.17■■■■□ 3.06
CBX4-203ENST00000494546 SYCE3A1L190 88 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 METTL12A8MUP2 240 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 GNSP15586 552 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 FERP16591 822 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 ATXN3P54252 364 aaPredicted RBP34.16■■■■□ 3.06
CBX4-203ENST00000494546 PTP4A2Q12974 167 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 ZNF683Q8IZ20 524 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 JOSD2Q8TAC2 188 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 GANCQ8TET4 914 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 ALG14Q96F25 216 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 C1orf74Q96LT6 269 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 BTBD1Q9H0C5 482 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 MUC3BQ9H195 1237 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 TBC1D30Q9Y2I9 924 aa34.16■■■■□ 3.06
CBX4-203ENST00000494546 CCDC172P0C7W6 258 aa34.15■■■■□ 3.06
CBX4-203ENST00000494546 SDC4P31431 198 aa34.15■■■■□ 3.06
CBX4-203ENST00000494546 C15orf59Q2T9L4 293 aaPredicted RBP34.15■■■■□ 3.06
CBX4-203ENST00000494546 PHF13Q86YI8 300 aaPredicted RBP34.15■■■■□ 3.06
CBX4-203ENST00000494546 MMAAQ8IVH4 418 aaKnown RBP34.15■■■■□ 3.06
CBX4-203ENST00000494546 DNASE2BQ8WZ79 361 aa34.15■■■■□ 3.06
CBX4-203ENST00000494546 PABPC3Q9H361 631 aaKnown RBP34.15■■■■□ 3.06
CBX4-203ENST00000494546 SLC25A13Q9UJS0 675 aa34.15■■■■□ 3.06
CBX4-203ENST00000494546 LAMA1P25391 3075 aa34.15■■■■□ 3.06
CBX4-203ENST00000494546 SRGAP2O75044 1071 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 CALB1P05937 261 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 CCDC14Q49A88 953 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 RAB6CQ53S08 254 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 ACBD5Q5T8D3 534 aaPredicted RBP34.14■■■■□ 3.06
CBX4-203ENST00000494546 LRSAM1Q6UWE0 723 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 STK40Q8N2I9 435 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 SNX19Q92543 992 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 PTPRN2Q92932 1015 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 HAPLN3Q96S86 360 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 SELENOOQ9BVL4 669 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 RAB6CQ9H0N0 254 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 C6orf106Q9H6K1 298 aaPredicted RBP34.14■■■■□ 3.06
CBX4-203ENST00000494546 MPP6Q9NZW5 540 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 NCKAP1Q9Y2A7 1128 aa34.14■■■■□ 3.06
CBX4-203ENST00000494546 C2CD4BA6NLJ0 364 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 DRGXA6NNA5 263 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 E9PAM4 449 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 ENDOD1O94919 500 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 SEMA4FO95754 770 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 RHOCP08134 193 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 KRT3P12035 628 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 IQCB1Q15051 598 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 CST6Q15828 149 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 SH3PXD2AQ5TCZ1 1133 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 TFAP2DQ7Z6R9 452 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 ZCCHC9Q8N567 271 aaKnown RBP34.13■■■■□ 3.05
CBX4-203ENST00000494546 SCML1Q9UN30 329 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 OR51B4Q9Y5P0 310 aa34.13■■■■□ 3.05
CBX4-203ENST00000494546 MID1O15344 667 aa34.12■■■■□ 3.05
CBX4-203ENST00000494546 VAV1P15498 845 aa34.12■■■■□ 3.05
CBX4-203ENST00000494546 ACCSLQ4AC99 568 aa34.12■■■■□ 3.05
CBX4-203ENST00000494546 BAP1Q92560 729 aa34.12■■■■□ 3.05
CBX4-203ENST00000494546 NAP1L5Q96NT1 182 aaPredicted RBP34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms