RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 H0Y626 953 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 MOCS3O95396 460 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 CHRNB2P17787 502 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 MMP8P22894 467 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 OXTRP30559 389 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 CXCR3P49682 368 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 TPMTP51580 245 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 OXCT1P55809 520 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ZNF33AQ06730 810 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 SLC25A52Q3SY17 297 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 C5orf22Q49AR2 442 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 STPG1Q5TH74 334 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 SLC23A3Q6PIS1 610 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 BNIPLQ7Z465 357 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 RABEPKQ7Z6M1 372 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ZNF419Q96HQ0 510 aaPredicted RBP13.6□□□□□ -0.23
ERCC3-209ENST00000494464 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 HSPA12BQ96MM6 686 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 PIGVQ9NUD9 493 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ZNHIT6Q9NWK9 470 aaKnown RBP13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 WSB2Q9NYS7 404 aaPredicted RBP13.6□□□□□ -0.23
ERCC3-209ENST00000494464 TMEM59LQ9UK28 342 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
ERCC3-209ENST00000494464 ATXN2Q99700 1313 aaKnown RBP13.6□□□□□ -0.23
ERCC3-209ENST00000494464 PATE3B3GLJ2 98 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 TM4SF5O14894 197 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 NDUFS2O75306 463 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 PAGE1O75459 146 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 F9P00740 461 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 SRPRAP08240 638 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ACADMP11310 421 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ITPKAP23677 461 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 FLT3P36888 993 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 GSCP56915 257 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ST8SIA6P61647 398 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ZBTB16Q05516 673 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 AUHQ13825 339 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 HNRNPA1L2Q32P51 320 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 TRIM61Q5EBN2 209 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ACBD5Q5T8D3 534 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 IL31Q6EBC2 164 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 WDR59Q6PJI9 974 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 MMS22LQ6ZRQ5 1243 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 ZNF366Q8N895 744 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 CADM4Q8NFZ8 388 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 CPA5Q8WXQ8 436 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 FOXJ1Q92949 421 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 TOE1Q96GM8 510 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 RPRD1AQ96P16 312 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 TBCBQ99426 244 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
ERCC3-209ENST00000494464 PRSS16Q9NQE7 514 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 SUN2Q9UH99 717 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 VANGL2Q9ULK5 521 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
ERCC3-209ENST00000494464 MED19A0JLT2 244 aaPredicted RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 DCDC2BA2VCK2 349 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 UNGP13051 313 aaPredicted RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 PLK1P53350 603 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 RNASE9P60153 205 aaKnown RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 CENPCQ03188 943 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 DEUP1Q05D60 604 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 C2CD6Q53TS8 623 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 TRNP1Q6NT89 227 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 CIR1Q86X95 450 aaPredicted RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 CACUL1Q86Y37 369 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 CCDC170Q8IYT3 715 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 BAP1Q92560 729 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 IGSF8Q969P0 613 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 TKTL2Q9H0I9 626 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 PCED1AQ9H1Q7 454 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 WDCPQ9H6R7 721 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 METTL5Q9NRN9 209 aaKnown RBP13.58□□□□□ -0.23
ERCC3-209ENST00000494464 ERVW-1Q9UQF0 538 aa13.58□□□□□ -0.23
ERCC3-209ENST00000494464 DOCK4Q8N1I0 1966 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 GOLGA8SH3BPF8 625 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 I6L893 689 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 CLDN11O75508 207 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 RDXP35241 583 aaKnown RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 PI4KAP42356 2102 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 IRAK1P51617 712 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 IRX4P78413 519 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ECT2LQ008S8 904 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 SULT2A1Q06520 285 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms