RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 NR0B2Q15466 257 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 SURF1Q15526 300 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 KMT5BQ4FZB7 885 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 C9orf64Q5T6V5 341 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 L1TD1Q5T7N2 865 aaKnown RBP7.07□□□□□ -1.28
FN1-225ENST00000494446 SCARA5Q6ZMJ2 495 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 KIAA0907Q7Z7F0 614 aaPredicted RBP7.07□□□□□ -1.28
FN1-225ENST00000494446 SCD5Q86SK9 330 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 STK40Q8N2I9 435 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 GPD1LQ8N335 351 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.07□□□□□ -1.28
FN1-225ENST00000494446 OR13H1Q8NG92 308 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 WFDC5Q8TCV5 224 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 SLC2A14Q8TDB8 520 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 JPH3Q8WXH2 748 aaPredicted RBP7.07□□□□□ -1.28
FN1-225ENST00000494446 KLK6Q92876 244 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 TMA16Q96EY4 203 aaKnown RBP7.07□□□□□ -1.28
FN1-225ENST00000494446 CALML4Q96GE6 196 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 MYO19Q96H55 970 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 SLC12A9Q9BXP2 914 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 STRADBQ9C0K7 418 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 SMYD3Q9H7B4 428 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 CSNK1G1Q9HCP0 422 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 BLOC1S4Q9NUP1 217 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 FAM49BQ9NUQ9 324 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 PLA2G2EQ9NZK7 142 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 NCKIPSDQ9NZQ3 722 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 TUBD1Q9UJT1 453 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 ACSL6Q9UKU0 697 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 STRIP2Q9ULQ0 834 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 SHANK1Q9Y566 2161 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 MTORP42345 2549 aa7.07□□□□□ -1.28
FN1-225ENST00000494446 TNRC6AQ8NDV7 1962 aaKnown RBP7.07□□□□□ -1.28
FN1-225ENST00000494446 SPENQ96T58 3664 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 A0A087X0B3 334 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 EDDM13A0A1B0GTR0 161 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 TARSL2A2RTX5 802 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 EME2A4GXA9 379 aaPredicted RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 HHLA1C9JL84 531 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 NVLO15381 856 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 SEMA7AO75326 666 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 VPS4BO75351 444 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 PPP1R37O75864 691 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 KIF20AO95235 890 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 GCNT3O95395 438 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 FAM200BP0CF97 657 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 RNF224P0DH78 156 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 DLATP10515 647 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 PRLRP16471 622 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 TNNI1P19237 187 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 DRD3P35462 400 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 MYL6P60660 151 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 HNRNPKP61978 463 aaKnown RBP eCLIP7.06□□□□□ -1.281e-9■■■□□ 18.8
FN1-225ENST00000494446 TRPC3Q13507 836 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 DEFB133Q30KQ1 61 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 RSRC2Q7L4I2 434 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 MAMDC2Q7Z304 686 aaPredicted RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 B3GNT8Q7Z7M8 397 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 TRIM69Q86WT6 500 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 CBWD2Q8IUF1 395 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 WDR49Q8IV35 697 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 FAM217AQ8IXS0 508 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 ZNF276Q8N554 614 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 RASSF8Q8NHQ8 419 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 WDR48Q8TAF3 677 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 RAD54LQ92698 747 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 CDK5RAP1Q96SZ6 601 aaKnown RBP7.06□□□□□ -1.28
FN1-225ENST00000494446 FOXP3Q9BZS1 431 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 FZD3Q9NPG1 666 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 MARCH2Q9P0N8 246 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 VPS4AQ9UN37 437 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 KIF3AQ9Y496 699 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 PCDHA5Q9Y5H7 936 aa7.06□□□□□ -1.28
FN1-225ENST00000494446 ZNF106Q9H2Y7 1883 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 PLRG1O43660 514 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 TBL1XO60907 577 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 PHACTR2O75167 634 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 ASLP04424 464 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 ITIH1P19827 911 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 UBA7P41226 1012 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 CSKP41240 450 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 CTSOP43234 321 aaPredicted RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 RPIAP49247 311 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 SGSHP51688 502 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 METAP1P53582 386 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 MAPK10P53779 464 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 CLDN2P57739 230 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 EIF3IQ13347 325 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 OR6B2Q6IFH4 312 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 CAPRIN2Q6IMN6 1127 aaKnown RBP7.05□□□□□ -1.28
FN1-225ENST00000494446 CLEC20AQ6ZU45 233 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 CCDC186Q7Z3E2 898 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 HEATR4Q86WZ0 1026 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 C12orf29Q8N999 325 aa7.05□□□□□ -1.28
FN1-225ENST00000494446 ZNF548Q8NEK5 533 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms