RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CREB1P16220 341 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ABCB4P21439 1286 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 KCNA3P22001 575 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ADORA2AP29274 412 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 GKP32189 559 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PRIM2P49643 509 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CACNB3P54284 484 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 DRG2P55039 364 aaKnown RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SH3BGRP55822 239 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 WNT3P56703 355 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 EVCP57679 992 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 NKX6-1P78426 367 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 LRRC74AQ0VAA2 488 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ZNF267Q14586 743 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TNIP1Q15025 636 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 LARS2Q15031 903 aaKnown RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TAF7Q15545 349 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PFKFB3Q16875 520 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ZNF750Q32MQ0 723 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 C5orf22Q49AR2 442 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SETMARQ53H47 684 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 IZUMO3Q5VZ72 239 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SLC30A6Q6NXT4 461 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CNSTQ6PJW8 725 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PTCHD4Q6ZW05 846 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 OVCH2Q7RTZ1 564 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 GALNTL5Q7Z4T8 443 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 NLRP14Q86W24 1093 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ZNF280BQ86YH2 543 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CACNA2D3Q8IZS8 1091 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 MMP21Q8N119 569 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SLC15A4Q8N697 577 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 LILRB1Q8NHL6 650 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 GSDMBQ8TAX9 411 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 DIS3LQ8TF46 1054 aaKnown RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 HPS3Q969F9 1004 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SYAP1Q96A49 352 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 KIAA1191Q96A73 305 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TMEM41AQ96HV5 264 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TIGD1Q96MW7 591 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TSGA13Q96PP4 275 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PRR25Q96S07 402 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 MEIS3Q99687 375 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SLX1AQ9BQ83 275 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SLF1Q9BQI6 1058 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 MESP1Q9BRJ9 268 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 SDF4Q9BRK5 362 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PI4K2AQ9BTU6 479 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 TXLNGYQ9BZA5 131 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CXorf36Q9H7Y0 433 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CERS4Q9HA82 394 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 GBA2Q9HCG7 927 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ITM2CQ9NQX7 267 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 IRAK4Q9NWZ3 460 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 HOXC10Q9NYD6 342 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 DACT1Q9NYF0 836 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ORC3Q9UBD5 711 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 RABL2AQ9UBK7 228 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CPA4Q9UI42 421 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CTNNA3Q9UI47 895 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 CDC23Q9UJX2 597 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 C19orf53Q9UNZ5 99 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.42□□□□□ -2.02
PTPN12-212ENST00000494248 PCDHGB6Q9Y5F9 930 aa2.42□□□□□ -2.02
PTPN12-212ENST00000494248 EVPLQ92817 2033 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 IGLV5-39A0A0G2JS06 123 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 C17orf113A0A1B0GUU1 675 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 ERICH4A6NGS2 130 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 H3BML4 177 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 NDC80O14777 642 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 IPO8O15397 1037 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 HOXC11O43248 304 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 RRP9O43818 475 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 TSPAN3O60637 253 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 TBCAO75347 108 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 CAMTA2O94983 1202 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 SYF2O95926 243 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 MT-ND3P03897 115 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 SLC3A2P08195 630 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 THEGLP0DJG4 465 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 SFTPCP11686 197 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 ALOX12P18054 663 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 TNFSF4P23510 183 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 PEX2P28328 305 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 ATP5DP30049 168 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 ABCD1P33897 745 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 TECP42680 631 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 LIFRP42702 1097 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 TNNT3P45378 269 aaPredicted RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 SLC11A2P49281 568 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 CASP5P51878 434 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 LIMK1P53667 647 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 PSG6Q00889 435 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 UBXN1Q04323 297 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 MRPL28Q13084 256 aaKnown RBP2.41□□□□□ -2.02
PTPN12-212ENST00000494248 MTX1Q13505 466 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 PRKG1Q13976 671 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 BECN1Q14457 450 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 SEC23BQ15437 767 aa2.41□□□□□ -2.02
PTPN12-212ENST00000494248 KRTAP24-1Q3LI83 254 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms