RNA–Protein interactions for RNA: ENST00000493698.1

TFIP11-215, Transcript of tuftelin interacting protein 11, human

TSL 3

Gene TFIP11, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFIP11-215	ENST00000493698	SRGAP2	O75044	1071 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	RNF40	O75150	1001 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	GJB6	O95452	261 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	EGF	P01133	1207 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	SRPRA	P08240	638 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	DLD	P09622	509 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	TFE3	P19532	575 aa	Predicted RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CD72	P21854	359 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	MSN	P26038	577 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	EPHB2	P29323	1055 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	HOXC13	P31276	330 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CXCL12	P48061	93 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	HCAR3	P49019	387 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	DGKE	P52429	567 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	PLK1	P53350	603 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	YBEY	P58557	167 aa	Predicted RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	RPS24	P62847	133 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CCDC173	Q0VFZ6	552 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	MESD	Q14696	234 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	DPYSL2	Q16555	572 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	GAB4	Q2WGN9	574 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	PARP15	Q460N3	678 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	RETSAT	Q6NUM9	610 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	SYT13	Q7L8C5	426 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	C11orf74	Q86VG3	221 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	LRRC8A	Q8IWT6	810 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	RHOT1	Q8IXI2	618 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CHPF	Q8IZ52	775 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	RNF10	Q8N5U6	811 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CCDC185	Q8N715	623 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	ALS2CR12	Q96Q35	445 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	LRFN3	Q9BTN0	628 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	SNRNP25	Q9BV90	132 aa	Known RBP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	MUC3B	Q9H195	1237 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	ABCB8	Q9NUT2	735 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	TMEM248	Q9NWD8	314 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	ELOVL2	Q9NXB9	296 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	PLK2	Q9NYY3	685 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	MMP17	Q9ULZ9	603 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	TBC1D30	Q9Y2I9	924 aa		10.84	□□□□□ -0.67
TFIP11-215	ENST00000493698	CCDC163	A0A0D9SF12	145 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	GOLGA6L7	A0A1B0GV03	622 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	FAM86C2P	A6NEL3	165 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	WASH4P	A8MWX3	477 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZNF487	B1APH4	448 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	PJA2	O43164	708 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	CREB3	O43889	395 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	SYNCRIP	O60506	623 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	RAMP2	O60895	175 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZNF189	O75820	626 aa	Predicted RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	LRIG2	O94898	1065 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	DCN	P07585	359 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	CISD3	P0C7P0	127 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	HLA-F	P30511	346 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	NTSR1	P30989	418 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ATXN1	P54253	815 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	OGDH	Q02218	1023 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	SLC20A2	Q08357	652 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZNF252P-AS1	Q0IIN9	211 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	BYSL	Q13895	437 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZNF528	Q3MIS6	628 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	TMCO4	Q5TGY1	634 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	MANEAL	Q5VSG8	457 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	SERPINA13P	Q6UXR4	307 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	C12orf40	Q86WS4	652 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	C1orf210	Q8IVY1	113 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	CFAP52	Q8N1V2	620 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	PHTF2	Q8N3S3	785 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	RTL3	Q8N8U3	475 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	DCAF4L2	Q8NA75	395 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	RPLP0P6	Q8NHW5	317 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	USP33	Q8TEY7	942 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	CASKIN2	Q8WXE0	1202 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZNF670	Q9BS34	389 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	PACSIN1	Q9BY11	444 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	MAGEH1	Q9H213	219 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	CALCOCO1	Q9P1Z2	691 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	SUN2	Q9UH99	717 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	PCSK1N	Q9UHG2	260 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	XPO7	Q9UIA9	1087 aa	Known RBP	10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	VPS28	Q9UK41	221 aa		10.83	□□□□□ -0.68
TFIP11-215	ENST00000493698	GOLGA6L9	A6NEM1	432 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZSCAN12	O43309	604 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	APBB3	O95704	486 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	HOXB2	P14652	356 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	ZFX	P17010	805 aa	Predicted RBP	10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	HOXA6	P31267	233 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	SLC6A11	P48066	632 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	NDST2	P52849	883 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	PTPN5	P54829	565 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	ECT2L	Q008S8	904 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	SLC25A11	Q02978	314 aa	Known RBP	10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	LMAN2	Q12907	356 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	GEN1	Q17RS7	908 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	PLEKHG6	Q3KR16	790 aa		10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	FNDC3B	Q53EP0	1204 aa	Known RBP	10.82	□□□□□ -0.68
TFIP11-215	ENST00000493698	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms