RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 H7C0C1 242 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 TBX10O75333 385 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 ETS1P14921 441 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 MX2P20592 715 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 RBL1P28749 1068 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 AVPR1AP37288 418 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 ATP5OP48047 213 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 SGSHP51688 502 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 CDH4P55283 916 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 BRD3Q15059 726 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 PPP1R7Q15435 360 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 RABGAP1LQ5R372 815 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 DARS2Q6PI48 645 aaKnown RBP12.99□□□□□ -0.33
VPS52-220ENST00000493674 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
VPS52-220ENST00000493674 LRRC49Q8IUZ0 686 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 NPAS3Q8IXF0 933 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 FAM71DQ8N9W8 422 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
VPS52-220ENST00000493674 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 SH3RF2Q8TEC5 729 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 AENQ8WTP8 325 aaKnown RBP12.99□□□□□ -0.33
VPS52-220ENST00000493674 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS52-220ENST00000493674 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 RPRD1AQ96P16 312 aaPredicted RBP12.99□□□□□ -0.33
VPS52-220ENST00000493674 LGMNQ99538 433 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 FAM129AQ9BZQ8 928 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 S1PR5Q9H228 398 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 ZDHHC18Q9NUE0 388 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 TDP1Q9NUW8 608 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 WHRNQ9P202 907 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 C5orf42Q9H799 3197 aa12.99□□□□□ -0.33
VPS52-220ENST00000493674 A0A1B0GVM2 712 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 C5orf60A6NFR6 353 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SGK1O00141 431 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 CLDN11O75508 207 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 GCATO75600 419 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SEC31AO94979 1220 aaKnown RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 FSHRP23945 695 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 LTBRP36941 435 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 YBEYP58557 167 aaPredicted RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 RPS24P62847 133 aaKnown RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 WASHC5Q12768 1159 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 KCTD19Q17RG1 926 aaPredicted RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 P3H1Q32P28 736 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 RHBDF2Q6PJF5 856 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 ZDHHC24Q6UX98 284 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 PRUNE1Q86TP1 453 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 BBS7Q8IWZ6 715 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 NETO2Q8NC67 525 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 HNRNPLLQ8WVV9 542 aaKnown RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 HTR3CQ8WXA8 447 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 RSAD2Q8WXG1 361 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 ING5Q8WYH8 240 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SNF8Q96H20 258 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 MSLNLQ96KJ4 702 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SLC39A8Q9C0K1 460 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 ADAM7Q9H2U9 754 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 TRPV4Q9HBA0 871 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 TBC1D30Q9Y2I9 924 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 SH3BP1Q9Y3L3 701 aa12.98□□□□□ -0.33
VPS52-220ENST00000493674 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
VPS52-220ENST00000493674 MYO10Q9HD67 2058 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 KCNN4O15554 427 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 MTSS1O43312 755 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 MAFKO60675 156 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 ZSCAN5DPP0CG00 497 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 CCNCP24863 283 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 MAGEA6P43360 314 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 NRLP54845 237 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 IFI35P80217 286 aaPredicted RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 DLX2Q07687 328 aaPredicted RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 PARP15Q460N3 678 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 MPP7Q5T2T1 576 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 HEATR6Q6AI08 1181 aaKnown RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 CXorf57Q6NSI4 855 aaKnown RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 C4orf22Q6V702 233 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 ZNF783Q6ZMS7 281 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 GSTA5Q7RTV2 222 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
VPS52-220ENST00000493674 CFAP52Q8N1V2 620 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 CCDC33Q8N5R6 958 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 MAML1Q92585 1016 aa12.97□□□□□ -0.33
VPS52-220ENST00000493674 ART4Q93070 314 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms