RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 RAP1GAP2Q684P5 730 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3GQ6DHY5 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TAC4Q86UU9 113 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 PPM1KQ8N3J5 372 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TSC1Q92574 1164 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 PTPRN2Q92932 1015 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 KAT5Q92993 513 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 SLC39A13Q96H72 371 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 CCDC34Q96HJ3 373 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 NT5C1BQ96P26 610 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 XPO7Q9UIA9 1087 aaKnown RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 APOEP02649 317 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 VAV1P15498 845 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 TACR2P21452 398 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 MZF1P28698 734 aaPredicted RBP12.74□□□□□ -0.37
SAMM50-205ENST00000493621 NUCB2P80303 420 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 NNTQ13423 1086 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 FBXL19Q6PCT2 694 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.74□□□□□ -0.37
SAMM50-205ENST00000493621 CHSY1Q86X52 802 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 OXR1Q8N573 874 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
SAMM50-205ENST00000493621 PRORYQ9H606 182 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 ERVMER34-1Q9H9K5 563 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 ST7Q9NRC1 585 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 TJP2Q9UDY2 1190 aa12.74□□□□□ -0.37
SAMM50-205ENST00000493621 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
SAMM50-205ENST00000493621 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 CAPN9O14815 690 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 RRP8O43159 456 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 LATO43561 262 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 MAT2AP31153 395 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 DRD3P35462 400 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 NNMTP40261 264 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 RXRGP48443 463 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 METAP1P53582 386 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 C19orf57Q0VDD7 668 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 RTP5Q14D33 572 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 COBLL1Q53SF7 1204 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 SFMBT2Q5VUG0 894 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 SYPL2Q5VXT5 272 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 CIR1Q86X95 450 aaPredicted RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 MFSD2AQ8NA29 543 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 NRSN2Q9GZP1 204 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
SAMM50-205ENST00000493621 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
SAMM50-205ENST00000493621 SART1O43290 800 aaKnown RBP12.72□□□□□ -0.37
SAMM50-205ENST00000493621 RTN2O75298 545 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 CKMT2P17540 419 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 GPD2P43304 727 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 ILKQ13418 452 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 DENND1BQ6P3S1 775 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 ARHGEF19Q8IW93 802 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 BAP1Q92560 729 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
SAMM50-205ENST00000493621 BTN2A3PQ96KV6 586 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 FCRL3Q96P31 734 aaPredicted RBP12.72□□□□□ -0.37
SAMM50-205ENST00000493621 GSDMAQ96QA5 445 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 SPAG5Q96R06 1193 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 CYTH4Q9UIA0 394 aa12.72□□□□□ -0.37
SAMM50-205ENST00000493621 F5H5T6 163 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 TK2O00142 265 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 ATXN7O15265 892 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 PMM2O15305 246 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 BRINP1O60477 761 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 SDC3O75056 442 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 C1QL1O75973 258 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 TRUB2O95900 331 aaKnown RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 GLDCP23378 1020 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 ACADSBP45954 432 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 SULT2A1Q06520 285 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 CETN1Q12798 172 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 SLC12A1Q13621 1099 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 STAT4Q14765 748 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 ACCSLQ4AC99 568 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms